Gene PSPTO_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3969 
Symbol 
ID1185645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4477264 
End bp4477911 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content59% 
IMG OID637395316 
Productradical SAM domain protein 
Protein accessionNP_793733 
Protein GI28871114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0978763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA CATTACGCAT CACCGAAATC TTTCACTCGT TGCAGGGTGA AACCCGTACG 
GCTGGCCTGC CCACCGTGTT TGTCCGCCTG ACCGGCTGCC CATTGCGCTG TCAGTACTGC 
GACAGTGCCT ACGCGTTCAG TGGCGGCACC ATTCAGACGC TGGATGACAT CGTCGGGCAA 
GTCGCGTCCT ATCGTCCCCG CTACGTCTGT GTCACCGGTG GCGAGCCGCT TGCCCAGCCC 
AACGCCATTC CATTGCTCAA GCGTCTTTGT GATGCGGGCT ATGAAGTGTC GCTGGAGACC 
AGTGGTGCAT TGGATATCTC GGCAGTGGAC CCTCGTGTCA GCCGCGTCGT CGATCTCAAG 
ACCCCGGGGT CGAAGGAAGT CGCACGCAAC CGCTACGAAA ACATGGCGTT GCTGACGCCG 
AACGATCAGG TCAAGTTCGT GATTTGCTCG CGCGAGGATT ATGACTGGGC GGTTTCCAAG 
CTGATCCAGT ACGGCCTCGA TCGGCGTGCG GGTGAGGTGC TGTTCTCGGC CAGCCATCAC 
GAGCTTAAAG GCCGCGACCT GGCAGACTGG ATAGTGGCCG ACAATTTGCC GGTACGCTTG 
CAGATGCAGT TGCATAAAAT TCTTTGGGAT GACGAGCCGG GGCGCTGA
 
Protein sequence
MQETLRITEI FHSLQGETRT AGLPTVFVRL TGCPLRCQYC DSAYAFSGGT IQTLDDIVGQ 
VASYRPRYVC VTGGEPLAQP NAIPLLKRLC DAGYEVSLET SGALDISAVD PRVSRVVDLK 
TPGSKEVARN RYENMALLTP NDQVKFVICS REDYDWAVSK LIQYGLDRRA GEVLFSASHH 
ELKGRDLADW IVADNLPVRL QMQLHKILWD DEPGR