Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3936 |
Symbol | |
ID | 1185610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4447263 |
End bp | 4448261 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637395286 |
Product | tail fiber domain protein |
Protein accession | NP_793705 |
Protein GI | 28871086 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGT ATAAGACCGG GACGGTTTCC GTCACCCAAA ATTCAAACGC CGTTATTGGC ATTGGTACGG CATTCATTGC AAACAGCCGC GTCGGCGATG GCTTTCGTGG CCCGGATGGC GGCTGGTACG AGGTGACGAA CATCGCCAGT GATACGGCCA TGTCGATATC GCCAAACTAT CAGGGTGCTA CCAACGGCGC TGGCGGGTAT GCGCTGGCTC CGCTGCAGGG CTACGTCAAG GAATCTGCCG ACCGGCTGCG CGCTTTGGTT TTGCAGTACG GCGACAAGCT GGCGGCCCTC GGCACGACGG GCAACTACGA TATCCTGCCT CTGAACAAGG GCGGGACTGG CGTTGCGGTT TCGAGCAATG CGGCGCTTCT CGTCGCACTA GGGGCGATGC CGTCCACGGG TGGTGCGTAC GCGCCAAAAT TCCAGAACGT TCAGGTTTCA CAAGTTTCCG TTACGGCCAC CCAGGGCGGT TACATGGGCT GGAACGAAGG TTACGTACCT GGCTTTAGCG GTGAGGTTGC ATTCGTTTGC AACAAGGGTG GCGGTACTGG CGGATTCACA TTCAGCACCG TAAACGCGAA TAACACCGAG CGTACCGGTG TCGCCACGCT GACCTCTGCG GGGGTTTTTA ACGCTTCCGG GCTTCAGTTG GCTGGTCGCA ATGTTGTGGA GGCTGGAAGC AACACCAATG GTAACTTTGT AAGGTTTGGA GATGGCACCC AGATCTGCTG GAATCGTGCT TATGCTTTTG GTCCTTCCGG TGCAGGGATT ACCGCTACAG CATTCTGGAC GCCGCCAATG CCATTTGTTG GCAACGCAGC AGAAATAAGC GTAACCCTAC AATTCGCAGA ATCAAGCGAC AATTTCACGT GCTCAAGAAT CAGCGGATAT ATGGTTGCAG GCAGTGAAAC CCGCGCAACT ATTACCGCAA ACTTCAGTGT TTCACAAGTT TACAGGCTTG GCCTGATGGC TATAGGAAGG TGGTTCTAA
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Protein sequence | MPWYKTGTVS VTQNSNAVIG IGTAFIANSR VGDGFRGPDG GWYEVTNIAS DTAMSISPNY QGATNGAGGY ALAPLQGYVK ESADRLRALV LQYGDKLAAL GTTGNYDILP LNKGGTGVAV SSNAALLVAL GAMPSTGGAY APKFQNVQVS QVSVTATQGG YMGWNEGYVP GFSGEVAFVC NKGGGTGGFT FSTVNANNTE RTGVATLTSA GVFNASGLQL AGRNVVEAGS NTNGNFVRFG DGTQICWNRA YAFGPSGAGI TATAFWTPPM PFVGNAAEIS VTLQFAESSD NFTCSRISGY MVAGSETRAT ITANFSVSQV YRLGLMAIGR WF
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