Gene PSPTO_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3936 
Symbol 
ID1185610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4447263 
End bp4448261 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content55% 
IMG OID637395286 
Producttail fiber domain protein 
Protein accessionNP_793705 
Protein GI28871086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTGGT ATAAGACCGG GACGGTTTCC GTCACCCAAA ATTCAAACGC CGTTATTGGC 
ATTGGTACGG CATTCATTGC AAACAGCCGC GTCGGCGATG GCTTTCGTGG CCCGGATGGC
GGCTGGTACG AGGTGACGAA CATCGCCAGT GATACGGCCA TGTCGATATC GCCAAACTAT
CAGGGTGCTA CCAACGGCGC TGGCGGGTAT GCGCTGGCTC CGCTGCAGGG CTACGTCAAG
GAATCTGCCG ACCGGCTGCG CGCTTTGGTT TTGCAGTACG GCGACAAGCT GGCGGCCCTC
GGCACGACGG GCAACTACGA TATCCTGCCT CTGAACAAGG GCGGGACTGG CGTTGCGGTT
TCGAGCAATG CGGCGCTTCT CGTCGCACTA GGGGCGATGC CGTCCACGGG TGGTGCGTAC
GCGCCAAAAT TCCAGAACGT TCAGGTTTCA CAAGTTTCCG TTACGGCCAC CCAGGGCGGT
TACATGGGCT GGAACGAAGG TTACGTACCT GGCTTTAGCG GTGAGGTTGC ATTCGTTTGC
AACAAGGGTG GCGGTACTGG CGGATTCACA TTCAGCACCG TAAACGCGAA TAACACCGAG
CGTACCGGTG TCGCCACGCT GACCTCTGCG GGGGTTTTTA ACGCTTCCGG GCTTCAGTTG
GCTGGTCGCA ATGTTGTGGA GGCTGGAAGC AACACCAATG GTAACTTTGT AAGGTTTGGA
GATGGCACCC AGATCTGCTG GAATCGTGCT TATGCTTTTG GTCCTTCCGG TGCAGGGATT
ACCGCTACAG CATTCTGGAC GCCGCCAATG CCATTTGTTG GCAACGCAGC AGAAATAAGC
GTAACCCTAC AATTCGCAGA ATCAAGCGAC AATTTCACGT GCTCAAGAAT CAGCGGATAT
ATGGTTGCAG GCAGTGAAAC CCGCGCAACT ATTACCGCAA ACTTCAGTGT TTCACAAGTT
TACAGGCTTG GCCTGATGGC TATAGGAAGG TGGTTCTAA
 
Protein sequence
MPWYKTGTVS VTQNSNAVIG IGTAFIANSR VGDGFRGPDG GWYEVTNIAS DTAMSISPNY 
QGATNGAGGY ALAPLQGYVK ESADRLRALV LQYGDKLAAL GTTGNYDILP LNKGGTGVAV
SSNAALLVAL GAMPSTGGAY APKFQNVQVS QVSVTATQGG YMGWNEGYVP GFSGEVAFVC
NKGGGTGGFT FSTVNANNTE RTGVATLTSA GVFNASGLQL AGRNVVEAGS NTNGNFVRFG
DGTQICWNRA YAFGPSGAGI TATAFWTPPM PFVGNAAEIS VTLQFAESSD NFTCSRISGY
MVAGSETRAT ITANFSVSQV YRLGLMAIGR WF