| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3924 |
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| Symbol | sfcA |
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| ID | 1185597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4438161 |
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| End bp | 4439882 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395276 |
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| Product | malate dehydrogenase |
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| Protein accession | NP_793695 |
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| Protein GI | 281494532 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.694196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAC GAAAAAGGCG ATTAGAGAAA ATGACCACCA CTTCGCGACC GTTGTACATT
TCCTACGCAG GACCCTCACT GCTGGAAATG CCCCTGCTGA ACAAAGGCAG TGCCTTTACC
CCGCAAGAGC GGATCGAATT CAACCTGATC GGGCTGCTGC CGCAGAACGT AGAGACGATC
GAAGAGCAAG TTACCCGGGT CTACAGCCAG TACAAACAGT GCGCGAGCGA CCTGGACAAG
CATATTTACC TGCGTTCGAT TCAGGACAAC AACGAGACCC TGTTCTTCCG CCTGCTGGAC
TCGCATCTGG ACGAGATGCT GCCGATCATT TACACCCCGA CGGTGGGTCA GGCGTGCCAG
GAGTTCTCCA AGATCTACCG TACGCATCGC GGCTTGTTCA TTTCTTACCC TGAGCGTGAC
CGCATCGATG ACATTTTGCG CAGCGCCACC AAGGACCGGA TCAAGATCAT TGTCGTGACC
GACAGCGAGC GAATTCTCGG TCTGGGTGAT CAGGGCATTG GTGGCATGGG CATCCCGATT
GGCAAGTTGT CGCTGTACAC CGCCTGCGGT GGTATCAGCC CGGCCTATAC GCTGCCGATC
GTGCTGGATG TCGGCACCAA CAACCGCGAG CTTCTGGACG ACCCGATGTA CATGGGCTGG
CGCCACGAGC GCGTGTCGGG CAAGGAATAC GAAGACTTCA TCGCGTTGTT CATCGACGCC
GTGCAGCGTC GCTGGCCGGA CGTGCTGTTG CAGTTTGAAG ACTTCGCCCA GTCCAACGCC
ATGCCGTTGC TTGAGAAGTA TCGGGACGAG CTGTGCTGCT TCAACGATGA CATCCAGGGC
ACCGCGTCGG TCGCAGTGGG CACATTGTTG GCGGCCTGCA AGGCCAAGAA TGAAACGCTT
GGCCAACAGA AAGTGGTGTT TGTCGGGGCC GGTTCGGCGG GGTGCGGGAT TGCTGAGCAC
ATCATCGCTG CGATGCGCAT TGAAGGCCTG AGCGAAAGCG AAGCGCGCAA ACGTATTTTC
ATGGTGGATC GTTTCGGTCT GCTGACTGAA GGCATGGGCA ACCTGCTGGA CTTCCAGCTA
CGTCTGGCGC AGAAATCCGC CGATGTCGCT GGCTGGACGG CAGGCACTGA GACCTTCCCG
CAGTTGCTCG ACGTGGTGAC GCATGCCGGT GCCACCGTGT TGATCGGCGT GTCCGGCCAG
CGCGGTCTGT TCACCGAGCA GGTGGTTCGC GAGCTGTACA AGCATTGCGC CAAGCCGCTG
GTCATGCCTC TGTCCAATCC GACTTCCAAG GTCGAAGCCA CGCCGGAAGA GATCCTGCGC
TGGACTGACG GTAACGCATT GGTTGCGACC GGCAGCCCGT TTGCGCCGGT CGAGATCAAT
GGCCGCACCG TGCACATCGC CCAGTGCAAC AACTCCTACA TCTTTCCGGG GATCGGTCTT
GGCGTGGTGG CCTGCAAGGC ATCGCGCATC ACTGATCGCA TGCTGATGGC GGCGTCCAAT
GCGCTGGCCG AGTGCTCGCC GATGGTCACG GGGCAGGGCG ACGCGGTTCT GCCGCCACTC
AAAGAGATTC AGCAGGTCAG CCGCAAGATT GCACTGGCTG TCGCCAAAGA AGCTCAGGCT
GAGGGGCTGG CGCTGGAAAC CTCGGAGGAA GCCTTGCTGG CGGCCATCGA ACGCAACTTC
TGGTTGCCGG GTTATCGCGC CTATCGTCGT CGCTCGGTCT GA
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| Protein sequence | MRRRKRRLEK MTTTSRPLYI SYAGPSLLEM PLLNKGSAFT PQERIEFNLI GLLPQNVETI
EEQVTRVYSQ YKQCASDLDK HIYLRSIQDN NETLFFRLLD SHLDEMLPII YTPTVGQACQ
EFSKIYRTHR GLFISYPERD RIDDILRSAT KDRIKIIVVT DSERILGLGD QGIGGMGIPI
GKLSLYTACG GISPAYTLPI VLDVGTNNRE LLDDPMYMGW RHERVSGKEY EDFIALFIDA
VQRRWPDVLL QFEDFAQSNA MPLLEKYRDE LCCFNDDIQG TASVAVGTLL AACKAKNETL
GQQKVVFVGA GSAGCGIAEH IIAAMRIEGL SESEARKRIF MVDRFGLLTE GMGNLLDFQL
RLAQKSADVA GWTAGTETFP QLLDVVTHAG ATVLIGVSGQ RGLFTEQVVR ELYKHCAKPL
VMPLSNPTSK VEATPEEILR WTDGNALVAT GSPFAPVEIN GRTVHIAQCN NSYIFPGIGL
GVVACKASRI TDRMLMAASN ALAECSPMVT GQGDAVLPPL KEIQQVSRKI ALAVAKEAQA
EGLALETSEE ALLAAIERNF WLPGYRAYRR RSV
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