| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3923 |
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| Symbol | |
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| ID | 1185596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4436285 |
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| End bp | 4437928 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637395275 |
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| Product | hypothetical protein |
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| Protein accession | NP_793694 |
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| Protein GI | 28871075 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.107021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATAA TGAGAACTGT TCGCCCAGAG GTTGTAACTC TATTTGTCAG CGGTTTACTG
TTGTTGGGCT TCAATATCAA TCTGTGGCAG CATTTATTCG CAATTACCAG TGGCGATGGC
AAAGGCCTGG CCATGCGCTT TGCCTTCGGC TTGATGATTT TCTGTGTATT CAATATTTTT
TTGACGCTGT TGGCGTTCCG TCGTGTGTTT AAACCTGTGG TGATCTTTCT GTTTATGGTC
AGCGCCAGTG TGGTTTATTT CATGACCGAA TACGGCGTCA TGATTGACGC CGGTATGTTC
CGAAACTTTG CCGAAACCAA CGTGACTGAA GTTCAGGGGC TGTTGTCTTT GAAACTGGTC
GTGTACATCG CTTTGTTGGG TGTGCTGCCG TCGCTGATTC TGTGGAAACT GCCGATCAGT
TATCGCCGCT GGCACCTGGA GCTGTTCAGC AAGCTGGTGG TTATTGTGGT CTGTAGTGTG
GCCATCGGCG GCGTGGCATT GGCGAACTAT CAGGGGTTGT CCTCGTTGTT TCGCAATCAC
CACGAATTGC GTCTGATGGT CGTGCCGAGC AACTACATGG GTGCCTCGAT CGGCTACCTG
AGCGAACAGG TCATCTCGGC ACAGCGCCCA TTCGTCAAGA TTGGCGAAGA CGCCAAACGC
TCGCCGGACT GGGCCACGCA TGCCCGCAAA TCACTGACGG TGCTGGTCGT GGGCGAGAGC
GCCCGGGCGG AAAACTTCGG GATCCTGGGT TATGGTCGCA ATACCACGCC TAACTTGAAC
AAAGAGAACG GGCTGGTCGC GTTTACCGAT GTTTATTCAT GCGGTACTGA AACAGCGGTG
TCGGTGCCTT GCATGTTTTC CAACATGGGG CGCAAGAACT ACAACGCAAC CAAGGCCCGT
AATCAGGAAG GCTTGCTTGA TGTGCTGAAA CATGCGGGTA TAGAAGTGGC GTGGCGTGAC
AATCAGTCGG GTTGCAAAGG CACCTGTGAC AGGGTGACGT TCCAGGACGT GAGCAATCTC
ACGGACCCGC TGCTATGCAA CAGTCATGAA TGCCGGGATG AGATCCTGTT GCAAAACCTG
CAGGGCTTTA TCGACAGTCT CGACAAGGAC ACCGTTCTTG TCCTGCACCA GATGGGCAGT
CACGGGCCGG AATATTACAA GCGCTACCCA AAAGAGTTTG AAAAGTTTAC CCCGGTGTGT
GAAAGCAATG CGCTGAACAA TTGCAGCCGG GACAGCATCG TCAATGCCTA CGACAATACG
TTGCTGTATA CCGACCATGT GCTGTCCACA CTGATTGACC TGTTGCGCAG TAATCAGGCC
AAGGTTGATA CGGCAATGGT GTACCTGTCG GATCATGGCG AATCCCTTGG CGAGTACAAC
TTGTTCCTGC ACGGCACCCC CTATGTACTG GCGCCAGATC AACAGAAGCA TGTGCCCATG
CTGATCTGGT TGTCCGATAC CTATCAGAAG TCTTTCGCCG TCACGCCGGA CTGTCTTGCC
AAACAGCGCA ACGCGCCACT GAGCCAGGAC AATCTTTTTC ACTCCATGCT CGGCCTGTTG
AAAGTCGATA CCAAGGTCTA TGACCCGAGT CTGGATATGT TTGCCGGGTG CCGTAGTGAG
CTGGCGGCGG CTGACAAGCA ATGA
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| Protein sequence | MPIMRTVRPE VVTLFVSGLL LLGFNINLWQ HLFAITSGDG KGLAMRFAFG LMIFCVFNIF
LTLLAFRRVF KPVVIFLFMV SASVVYFMTE YGVMIDAGMF RNFAETNVTE VQGLLSLKLV
VYIALLGVLP SLILWKLPIS YRRWHLELFS KLVVIVVCSV AIGGVALANY QGLSSLFRNH
HELRLMVVPS NYMGASIGYL SEQVISAQRP FVKIGEDAKR SPDWATHARK SLTVLVVGES
ARAENFGILG YGRNTTPNLN KENGLVAFTD VYSCGTETAV SVPCMFSNMG RKNYNATKAR
NQEGLLDVLK HAGIEVAWRD NQSGCKGTCD RVTFQDVSNL TDPLLCNSHE CRDEILLQNL
QGFIDSLDKD TVLVLHQMGS HGPEYYKRYP KEFEKFTPVC ESNALNNCSR DSIVNAYDNT
LLYTDHVLST LIDLLRSNQA KVDTAMVYLS DHGESLGEYN LFLHGTPYVL APDQQKHVPM
LIWLSDTYQK SFAVTPDCLA KQRNAPLSQD NLFHSMLGLL KVDTKVYDPS LDMFAGCRSE
LAAADKQ
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