Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3915 |
Symbol | |
ID | 1185588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4430482 |
End bp | 4431258 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395267 |
Product | copper resistance protein B |
Protein accession | NP_793686 |
Protein GI | 28871067 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGTA TGGATCATGG CAGCCACTCG ATGCCCATGG GCGCCAGCAG CGACGCCCCG GCGCAGAGCC GAACGCCGAT CCCGCCCGTC ACCGACGCGG ACCGGGCTGC GGTGTACACC AGCCATAGCG GGCATCAGGT CCACGACAGC GCCATCAACA GTTACTTTGT GGCCGACAAG CTGGAATGGC AGGACGCAAA CGACGGCAGC GCGCTGGCCT GGGACCTGTC CGGCTGGATT GGCGGTGATA TCGACCGCTT GCTGCTGCGC TCCGAAGGCG AACGCACCAA CGGCAAAACC GAAGAGGCAG AAGTCCAGGC GTTATGGGGC CATGCCGTCA GCTCGTCGTG GGACGTGGTG GCCGGAGCAC GACAGGACTT CAAACCGGGC GCGCCACAGA CTTGGGCGGC TTTCGGCCTG CAAGGGCAGG CGATTTCGGA TCTCGACGTT GAAGCCACGG CATTCATTGG CGACGCCGGG CAGACGGCAG CGCGTCTGGA AGCCGACTAC GACCTGTTGT TGACCAATGA CCTGATCCTT CAACCCACTG GCGAACTGAA CTTCTACGGC AAGAACGACC CGCAACGCGG CAACGGCTCG GGCCTGTCGA CCAGTGAGTT CGGTCTGCGG CTGCGCTATG AAATCACACC GCAATTTGCG CCTTACGTGG GCGTGACCTG GAATCGTTCC TACGGCAAGA CTGCTGATTA CGCACGCGAA GACGATGAGG ATGTTGCCCA GGCGCGTCTT GTCGTGGGTT TGCGCCTGTG GTTCTGA
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Protein sequence | MEGMDHGSHS MPMGASSDAP AQSRTPIPPV TDADRAAVYT SHSGHQVHDS AINSYFVADK LEWQDANDGS ALAWDLSGWI GGDIDRLLLR SEGERTNGKT EEAEVQALWG HAVSSSWDVV AGARQDFKPG APQTWAAFGL QGQAISDLDV EATAFIGDAG QTAARLEADY DLLLTNDLIL QPTGELNFYG KNDPQRGNGS GLSTSEFGLR LRYEITPQFA PYVGVTWNRS YGKTADYARE DDEDVAQARL VVGLRLWF
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