Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3893 |
Symbol | |
ID | 1185564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4405578 |
End bp | 4405967 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395243 |
Product | glyoxalase, putative |
Protein accession | NP_793664 |
Protein GI | 28871045 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0222146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGATC ATCTGGACCA CATTGTACTG ACCACCACTG ACGTTGACGC CTGCAAGGAT TTCTACGTGC GCGTCCTGGG TATGACCCCT GAGCGCTTCC GTCAGGGGCG CCTGGCGTTT CGCTTTGGCA ATCAGAAAAT CAACGTTCAT GAGCGTGGCA AGGAGTTCGA GCCCAAGGCC CACTTGCCTG TGCCGGGTGC ACTGGATTTA TGTTTCATCG CCAGCATCGC GCTGGAAGAG GTGATAGCGC ATCTGCAGGA TCAGGAATGG CCCATTGTCG AAGGTCCGGT CGAGCGTACC GGGGCAACCG GGCCGATCCG CTCGGTGTAT GTGCGTGACC CTGACCTGAA CCTGATCGAG ATTTCCGAAC TGGCTGATCC ACGCACCTGA
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Protein sequence | MIDHLDHIVL TTTDVDACKD FYVRVLGMTP ERFRQGRLAF RFGNQKINVH ERGKEFEPKA HLPVPGALDL CFIASIALEE VIAHLQDQEW PIVEGPVERT GATGPIRSVY VRDPDLNLIE ISELADPRT
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