Gene PSPTO_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3893 
Symbol 
ID1185564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4405578 
End bp4405967 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content58% 
IMG OID637395243 
Productglyoxalase, putative 
Protein accessionNP_793664 
Protein GI28871045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0222146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGATC ATCTGGACCA CATTGTACTG ACCACCACTG ACGTTGACGC CTGCAAGGAT 
TTCTACGTGC GCGTCCTGGG TATGACCCCT GAGCGCTTCC GTCAGGGGCG CCTGGCGTTT
CGCTTTGGCA ATCAGAAAAT CAACGTTCAT GAGCGTGGCA AGGAGTTCGA GCCCAAGGCC
CACTTGCCTG TGCCGGGTGC ACTGGATTTA TGTTTCATCG CCAGCATCGC GCTGGAAGAG
GTGATAGCGC ATCTGCAGGA TCAGGAATGG CCCATTGTCG AAGGTCCGGT CGAGCGTACC
GGGGCAACCG GGCCGATCCG CTCGGTGTAT GTGCGTGACC CTGACCTGAA CCTGATCGAG
ATTTCCGAAC TGGCTGATCC ACGCACCTGA
 
Protein sequence
MIDHLDHIVL TTTDVDACKD FYVRVLGMTP ERFRQGRLAF RFGNQKINVH ERGKEFEPKA 
HLPVPGALDL CFIASIALEE VIAHLQDQEW PIVEGPVERT GATGPIRSVY VRDPDLNLIE
ISELADPRT