Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3889 |
Symbol | |
ID | 1185560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4401489 |
End bp | 4401890 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395239 |
Product | hypothetical protein |
Protein accession | NP_793660 |
Protein GI | 28871041 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000344158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGCGG GGCGGCTGCC GGGGCTGTTG TTTGCGGTGG CACGCAAGGG CAACAGTGAA GGCAATCGTC TGGGCAAGCT CAAGGAAGAC CTGCGTTTGC TGCAGGCCCT GTGTCTGGCC TACTGGCGTG GCGAGTACCG AAGTATCAGC CCCAAGGCGA TTTTGTCCAT CGTCGCGGGC CTGATGTATT TTCTCAGCCC GCTGGACGCG ATTCCTGACT GGATTCCTGG CTTGGGAATG CTTGATGACA TTGCCGTACT GGCCTGGGTC ACCAAGCACC TGAGCGACGA GCTGGATGCT TTTCGCGCTT GGCGGGCGCA GCAATCGCCC GAAAAGCTGA TCGTGGTCGA GCAACTGCCC AAGACTCAGG CGCTGCTGGA AAAAGAGCGG GGTGGGGTAT AA
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Protein sequence | MAAGRLPGLL FAVARKGNSE GNRLGKLKED LRLLQALCLA YWRGEYRSIS PKAILSIVAG LMYFLSPLDA IPDWIPGLGM LDDIAVLAWV TKHLSDELDA FRAWRAQQSP EKLIVVEQLP KTQALLEKER GGV
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