Gene PSPTO_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3889 
Symbol 
ID1185560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4401489 
End bp4401890 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID637395239 
Producthypothetical protein 
Protein accessionNP_793660 
Protein GI28871041 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000344158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGCGG GGCGGCTGCC GGGGCTGTTG TTTGCGGTGG CACGCAAGGG CAACAGTGAA 
GGCAATCGTC TGGGCAAGCT CAAGGAAGAC CTGCGTTTGC TGCAGGCCCT GTGTCTGGCC
TACTGGCGTG GCGAGTACCG AAGTATCAGC CCCAAGGCGA TTTTGTCCAT CGTCGCGGGC
CTGATGTATT TTCTCAGCCC GCTGGACGCG ATTCCTGACT GGATTCCTGG CTTGGGAATG
CTTGATGACA TTGCCGTACT GGCCTGGGTC ACCAAGCACC TGAGCGACGA GCTGGATGCT
TTTCGCGCTT GGCGGGCGCA GCAATCGCCC GAAAAGCTGA TCGTGGTCGA GCAACTGCCC
AAGACTCAGG CGCTGCTGGA AAAAGAGCGG GGTGGGGTAT AA
 
Protein sequence
MAAGRLPGLL FAVARKGNSE GNRLGKLKED LRLLQALCLA YWRGEYRSIS PKAILSIVAG 
LMYFLSPLDA IPDWIPGLGM LDDIAVLAWV TKHLSDELDA FRAWRAQQSP EKLIVVEQLP
KTQALLEKER GGV