Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3863 |
Symbol | psyR |
ID | 1185534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4376977 |
End bp | 4377720 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637395214 |
Product | transcriptional regulator PsyR |
Protein accession | NP_793635 |
Protein GI | 28871016 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.831721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGTTC ATACCGTGAA AAACCAACTT GACTGTCCAC CGTTAAAGAT CAACGGCGCC CCTGCTCCGC TTCGCCAACT CATCGAAGAC TTTGAAAACG ACCTGCATCA TATTGGCGAC TTTACGTATG CCTATTTCAC CACGCCCAAG GCCCGTAAAG CCAAGCCCAT CATCCTTTCC AATTATCCCG ACTCATGGTT GAAATCTTAT ATTGCGTCCA ACTACCACCT GATCGACCCG ATCATCAAAC ATGCCTGGCA CAGCATTACA CCCTTCTTCT GGAGGGAAGC CAGAAACGCT GTTCAGTGCG TCGAAACCGA TGATTTCCTG AAACGATCGG CTAAATATCA ATTGTCCTCG GGGGCCACTT TCACCCTGCA CGATGCCAGT GGGCTTTTTG CCGCTCTGAG CCTGTGCAAT GCCAAGCAGC AGCATGACTT CGACCAGCGC ATCCGTGACA AGGCCGCTGA TATTCAGATG AGCCTCATTC GCTTCCACGA TCGCCTGATC AAGACCAGAG CGCCCCATGA ACTCTTTCCG CCCACCGCGA ATTGCAAGTT GTCCAGCCGC GAAACAGACA TCCTGAAATG GGTGGCAATG GGCAAGGCGT ATAGCGAAAT CGCCGAGATC TTTTCCATAT CGGAACGCAC GGTAAAATTT CACATGTCCA ACGTCTCAAG CAAACTCGAG GTCCGCACTG CAAAGCAGGC CGTTTACAAG GCCATCAAGA TGGGCATGGT CTGA
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Protein sequence | MEVHTVKNQL DCPPLKINGA PAPLRQLIED FENDLHHIGD FTYAYFTTPK ARKAKPIILS NYPDSWLKSY IASNYHLIDP IIKHAWHSIT PFFWREARNA VQCVETDDFL KRSAKYQLSS GATFTLHDAS GLFAALSLCN AKQQHDFDQR IRDKAADIQM SLIRFHDRLI KTRAPHELFP PTANCKLSSR ETDILKWVAM GKAYSEIAEI FSISERTVKF HMSNVSSKLE VRTAKQAVYK AIKMGMV
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