| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3792 |
|---|
| Symbol | |
|---|
| ID | 1185460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4294763 |
|---|
| End bp | 4295734 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637395142 |
|---|
| Product | serine/threonine protein phosphatase |
|---|
| Protein accession | NP_793566 |
|---|
| Protein GI | 28870947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.055034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC CGGCGCGTGG CTATGATCTG ATCGGTGACG TGCACGGGTG CGCCCATACC
CTGGAGCACT TGCTGGAACT GCTGGGCTAC CGTCTGCAGG CTGGCGTGTG GCGCCACCCT
GAGCGCATCG CGATTTTCCT CGGCGACATC ATCGACCGAG GGCCGCGTAT TCGCGAATCG
CTGCACATCG TGCGCGACAT GGTTCAGGCC GGGCAAGCGT ACTGCATCAT GGGCAACCAT
GAGTTCAATG CGCTGGGCTG GATGACACCG GCGCTGCCCG AGAGCGGTCA CCTGTTTGTG
CGCGAGCACA CCCCGCGCCA TGCCCGTTTG ATCGGCGAAA CACTGGCGCA ATTCGAAGCA
TATCCGGATG AATGGAACGA GTTCGTCAAC TGGTTCTACG AGCTGCCCCT GTATATTGAT
GCCGGACGTT TCCGAGTGGT GCACGCCTGC TGGGACGCGA CCCTGATCGA CCCGTTGCGC
GGCCTGCACG GGACCGGCTG CATCGACAGG CATTTTGTGC AAGCGTCGGC AGTGCCCGGC
AGTTTCGCCA GCAACGTGTT CAACCGCCTG TTGCGAGGCA CCGACATGCG CCTGCCGCAT
GGCCTGACCC TGACCGGTGG CGACGGGCTG ACGCGTGAGT TCTTCCGCAC CAAGTTCTGG
GAAGATAACC CGCAGACCTA CGGCGACGTG GTCTTCCAGC CCGACGCTCT GCCCGAAGGC
GTGGCCAAGA CGCCATTGTC CACGTCCGAA AAAAACGCAT TGCTGCGCTA CGGCAGCAAC
GAACCGCTGC TGTTTGTCGG TCATTACTGG CGCAGCGGTA TCCCCGCACC CATCCGGCCG
AACCTGGCAT GCCTGGATTA CAGCGCGGTG CTCTACGGCA AGCTGGTCGC CTATCGGCTG
GATCAGGAAA CACACGTCGA TCCGGACAAA TTCGTCTGGG TCGATGTTCA GCGTCCCGAG
GTTTCACCAT GA
|
|---|
| Protein sequence | MLDPARGYDL IGDVHGCAHT LEHLLELLGY RLQAGVWRHP ERIAIFLGDI IDRGPRIRES
LHIVRDMVQA GQAYCIMGNH EFNALGWMTP ALPESGHLFV REHTPRHARL IGETLAQFEA
YPDEWNEFVN WFYELPLYID AGRFRVVHAC WDATLIDPLR GLHGTGCIDR HFVQASAVPG
SFASNVFNRL LRGTDMRLPH GLTLTGGDGL TREFFRTKFW EDNPQTYGDV VFQPDALPEG
VAKTPLSTSE KNALLRYGSN EPLLFVGHYW RSGIPAPIRP NLACLDYSAV LYGKLVAYRL
DQETHVDPDK FVWVDVQRPE VSP
|
|---|
| |