Gene PSPTO_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3773 
Symbol 
ID1185441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4274862 
End bp4275575 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID637395123 
Producttranscriptional regulator, GntR family 
Protein accessionNP_793547 
Protein GI28870928 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.38941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACC GAAAGCCTTC CGACCGAAAA AGCATGCACG CCCGTATCGT CCAGGAACTG 
GGCATGCAGA TCGTATCCGG CCGTTTCAAA CCTGACGAAA AGCTGCCCGC CGAAGCGTTG
CTCTGCGAAG AATACGCGGT CAGCCGTCCG GTACTGCGCG AAGCCACCCG AGTGCTGGTG
GCCAAGGGGC TGGTTTACTC ACGGCCACGC GTCGGCACGG TGGTCAAGGC CCGCCGCGAA
TGGCACCTGC TGGACCCGGA CGTGCTGCAT TGGGTGATGC AAAGCTCGCC GCAGAACGAA
TTCTTCAACT TGCTGACCAG CGTGCGCGCC GTCATCGAGC CGGCTGTTGC AGCGCTGGCT
GCGCAACATG CCACGGACGC AGAAATCGAG TCGATCCACG AAGCCTACCT GCGCATGGAA
GCCGCACCGA CGCCGGAAGA CCTGCTGCAA CCGGACCTCG ACTTCCACAG CCGGATCGCC
GACGCCACCC ACAACGACCT GTTGGCGCAC TTGTGCAACA TGCTGTCACT GGCCTTGCGC
GAAGCACTCA AATACTCCAA CAAACGCCCC AACCTGCACG AGCTGGCCAT GCCCCGCCAC
AAAGCCATCC TTACCGCCAT CCAGAACCGC GACGCCCTCG GCGCACGCCA TGCCTCGCTG
GTGCAACTGG ACGATGCGCG CAATGCGCTG AGCGTAGTGT TGGGCGGCGG TTGA
 
Protein sequence
MDYRKPSDRK SMHARIVQEL GMQIVSGRFK PDEKLPAEAL LCEEYAVSRP VLREATRVLV 
AKGLVYSRPR VGTVVKARRE WHLLDPDVLH WVMQSSPQNE FFNLLTSVRA VIEPAVAALA
AQHATDAEIE SIHEAYLRME AAPTPEDLLQ PDLDFHSRIA DATHNDLLAH LCNMLSLALR
EALKYSNKRP NLHELAMPRH KAILTAIQNR DALGARHASL VQLDDARNAL SVVLGGG