Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3773 |
Symbol | |
ID | 1185441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4274862 |
End bp | 4275575 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395123 |
Product | transcriptional regulator, GntR family |
Protein accession | NP_793547 |
Protein GI | 28870928 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.38941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTACC GAAAGCCTTC CGACCGAAAA AGCATGCACG CCCGTATCGT CCAGGAACTG GGCATGCAGA TCGTATCCGG CCGTTTCAAA CCTGACGAAA AGCTGCCCGC CGAAGCGTTG CTCTGCGAAG AATACGCGGT CAGCCGTCCG GTACTGCGCG AAGCCACCCG AGTGCTGGTG GCCAAGGGGC TGGTTTACTC ACGGCCACGC GTCGGCACGG TGGTCAAGGC CCGCCGCGAA TGGCACCTGC TGGACCCGGA CGTGCTGCAT TGGGTGATGC AAAGCTCGCC GCAGAACGAA TTCTTCAACT TGCTGACCAG CGTGCGCGCC GTCATCGAGC CGGCTGTTGC AGCGCTGGCT GCGCAACATG CCACGGACGC AGAAATCGAG TCGATCCACG AAGCCTACCT GCGCATGGAA GCCGCACCGA CGCCGGAAGA CCTGCTGCAA CCGGACCTCG ACTTCCACAG CCGGATCGCC GACGCCACCC ACAACGACCT GTTGGCGCAC TTGTGCAACA TGCTGTCACT GGCCTTGCGC GAAGCACTCA AATACTCCAA CAAACGCCCC AACCTGCACG AGCTGGCCAT GCCCCGCCAC AAAGCCATCC TTACCGCCAT CCAGAACCGC GACGCCCTCG GCGCACGCCA TGCCTCGCTG GTGCAACTGG ACGATGCGCG CAATGCGCTG AGCGTAGTGT TGGGCGGCGG TTGA
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Protein sequence | MDYRKPSDRK SMHARIVQEL GMQIVSGRFK PDEKLPAEAL LCEEYAVSRP VLREATRVLV AKGLVYSRPR VGTVVKARRE WHLLDPDVLH WVMQSSPQNE FFNLLTSVRA VIEPAVAALA AQHATDAEIE SIHEAYLRME AAPTPEDLLQ PDLDFHSRIA DATHNDLLAH LCNMLSLALR EALKYSNKRP NLHELAMPRH KAILTAIQNR DALGARHASL VQLDDARNAL SVVLGGG
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