| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3765 |
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| Symbol | sbcD |
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| ID | 1185433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4263160 |
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| End bp | 4264404 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395115 |
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| Product | exonuclease SbcD |
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| Protein accession | NP_793539 |
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| Protein GI | 28870920 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0831731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGT TTCACACCTC CGACTGGCAT TTGGGTCAGA ACCTGCATGG CCAGGAACGG
GACTTCGAAC ATGCCTGCTT TCTGACCTGG CTGCTGGCCC GTCTGGCCGA ACGACAGCCT
GATGTGCTGC TGATAGCAGG CGACATCTTC GACACCGTCA ACCCGCCGGT CAAAGCCCAG
GAACGGCTGT ACGACTTCAT CGTCAACGCC CACGAGCAAC AGCCGCTGCT GACCATCGTG
ATGATTGCCG GCAACCATGA CTCCGGGTCG CGCATCGAAC TGCCCGCGCC GCTGATGCGC
CGTCTGCGCA CCCATGCGCT GGGCAGGGTG ATGTGGCTGA ACGACGGCGT GCTGGATGCC
GAACGTCTGC TGCTGCCGTT GCCCGATGCC AATGGCGACA TCAAGGCCTG GTGCCTGGCG
CTGCCCTTCC TGCGCCCCGC TGAAGTCACC GGCCCGACCC TGGGTGATGA CTACCTGCGC
GGCATTGGCC GGGTGCATGA ACTGCTGATC GATGCGGCCA ATCTCAAGCG CCAGCCAGGC
CAGGCATTGA TCGCCATCAG CCACGCACAC ATGGCGGGCG GCTCGGTCTC GGAAGACTCC
GAACGCAGCC TGATCATCGG CAACGCCGAA GCCTTGCCCG CCAGCCTGTT CGGGCCGAGC
ATCACCTACG TCGCCCTCGG CCATCTGCAC AAGCCGCAGC GGGTCAATGG TGAAGAGCGT
ATTCGCTACA GCGGCTCGCC GATCCCGCTG TCCTTTTCGG AAATCGGCTA CCAGCATCAG
ATTCTCGAGA TCAATTGCGA CGGCGACACG CTGACCAGCG TCGAGCCCTG CCTGATCCCG
CGCGCCGTCA ACCTGCAACG TCTCGGGCCT GCGCCATTGG CTGATCTGCT GGTGCAGCTC
AAGTCGCTGC CGGACATCGA CCTGCTCGCC GACCCGGACC GCCAGCCGTG GCTGGAAGTG
CGCGTGCGTC TGGATGAGCC GCAACCGGAC CTGCGCAACC AGATCGAAAC CGCGCTGCAA
GGCAAGGCCG TACGGCTGGT GCGCATCGGT GCCGAATACG CCGGTAAAGG CAGCGCCGAT
GGCAGCGACG GCGAGGCGGG CCTGATCGAA CTGGACCAGC TCACCCCACA GGAATTGTTC
AGCCGTGCCT GGCAAGACAA CTTTGGTAGC GAGGTGGACG AACAGACCCT GACCGATTTC
GCCACGCTGC TGCGTGAAGT TCAGCAGGAG AGCGAACAGC CATGA
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| Protein sequence | MRLFHTSDWH LGQNLHGQER DFEHACFLTW LLARLAERQP DVLLIAGDIF DTVNPPVKAQ
ERLYDFIVNA HEQQPLLTIV MIAGNHDSGS RIELPAPLMR RLRTHALGRV MWLNDGVLDA
ERLLLPLPDA NGDIKAWCLA LPFLRPAEVT GPTLGDDYLR GIGRVHELLI DAANLKRQPG
QALIAISHAH MAGGSVSEDS ERSLIIGNAE ALPASLFGPS ITYVALGHLH KPQRVNGEER
IRYSGSPIPL SFSEIGYQHQ ILEINCDGDT LTSVEPCLIP RAVNLQRLGP APLADLLVQL
KSLPDIDLLA DPDRQPWLEV RVRLDEPQPD LRNQIETALQ GKAVRLVRIG AEYAGKGSAD
GSDGEAGLIE LDQLTPQELF SRAWQDNFGS EVDEQTLTDF ATLLREVQQE SEQP
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