| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3742 |
|---|
| Symbol | cysS |
|---|
| ID | 1185410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4227791 |
|---|
| End bp | 4229173 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637395092 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | NP_793516 |
|---|
| Protein GI | 28870897 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.156882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCTA TTTACAACAC GCTCACCAAG AGCAAAGAAG TATTCAAACC GCTGGATGGC
AACAAGGTGC GCATGTACGT CTGCGGGATG ACCGTGTACG ACTACTGCCA CCTGGGGCAC
GGCCGCAGCA TGGTGGCGTT CGACCTGGTT ACCCGCTGGT TGCGCTTCAG CGGCTACGAC
CTGACGTATG TGCGCAATAT CACCGACATT GACGACAAGA TCATCAATCG CGCACGTGAC
AACGGCGAGT CGTTCGACGC GCTGACCGCG CGCATGATAG ATGCCATGCA TGAGGACGAG
GCGCGCCTCA ACATCCTCAA GCCGGACATG GAACCGCGTG CCACCGACCA TATCCCCGGC
ATGCATGCCA TGATCCAGAC GCTGATCGAC AAGGGCTATG CCTACGCGCC GGGCAACGGC
GATGTGTATT ACCGGGTCGG CAAGTTTCAG GGTTACGGCA AGCTGTCGCG CAAGAAGATT
GAAGACCTGC GCATCGGCGC GCGCATCGAA GTGGACGAGT CCAAGCAGGA TCCACTGGAC
TTCGTGCTCT GGAAAGGCGT CAAGCCAGGC GAGCCGAGCT GGGAGTCGCC GTGGGGTGCG
GGTCGCCCGG GCTGGCACAT CGAATGCTCG GTGATGTCCA CCTGCTGCCT GGGTGACACC
TTCGACATTC ATGGCGGCGG CAGCGATCTC GAGTTTCCGC ACCATGAAAA CGAAATCGCC
CAAAGCGAAG CGGCCACTGG CAAGCCTTAC GCCAACGCCT GGTTACACTG CGGGATGATC
CGCATCAATG GCGAGAAGAT GTCCAAGTCC TTGAACAACT TCTTCACCCT TCGCGACGTG
CTGGAAAAAT ACCACCCGGA AGTGGTGCGT TACCTGTTGG TGTCGAGCCA CTATCGCAGC
GCGATCAACT ATTCCGAAGA CAGCCTGCGC GAGTCCAAGG CAGCTCTGGA GCGCTTCTAT
CACGCGCTCA AAGGCTTGCC GGCTGCCGAG CCTGCAGGTG GCGAGGCGTT CGTCGAGCGT
TTCACCACCG CGATGAACGA TGACTTCGGT ACACCGGAAG CCTGCGCAGT GCTGTTCGAG
ATGGTTCGTG AAATCAACCG CCTGCGTGAA ACCGACGTTG CAGCAGCGGC GGGCCTGGCG
GCGCGTTTGA AGCAACTGGC CAGCGTGCTG GGTGTGCTGC AGCTGGAAGC CGACGACTTT
TTGCGCGCAG GCGCGCAAGG GCGGGTCGAT GCAGCAGAGG TAGAAGCGCT GATTCAGGCG
CGTCTGGCCG CGCGTGCAGC CAAAGACTGG GCCGAGTCCG ACCGAATCCG CGACCAGATC
ACCGCCATGG GCGTGCTTCT GGAAGACGGC AAGGGCGGCA CGACCTGGCG TCTGGGGGAC
TGA
|
|---|
| Protein sequence | MLSIYNTLTK SKEVFKPLDG NKVRMYVCGM TVYDYCHLGH GRSMVAFDLV TRWLRFSGYD
LTYVRNITDI DDKIINRARD NGESFDALTA RMIDAMHEDE ARLNILKPDM EPRATDHIPG
MHAMIQTLID KGYAYAPGNG DVYYRVGKFQ GYGKLSRKKI EDLRIGARIE VDESKQDPLD
FVLWKGVKPG EPSWESPWGA GRPGWHIECS VMSTCCLGDT FDIHGGGSDL EFPHHENEIA
QSEAATGKPY ANAWLHCGMI RINGEKMSKS LNNFFTLRDV LEKYHPEVVR YLLVSSHYRS
AINYSEDSLR ESKAALERFY HALKGLPAAE PAGGEAFVER FTTAMNDDFG TPEACAVLFE
MVREINRLRE TDVAAAAGLA ARLKQLASVL GVLQLEADDF LRAGAQGRVD AAEVEALIQA
RLAARAAKDW AESDRIRDQI TAMGVLLEDG KGGTTWRLGD
|
|---|
| |