| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3723 |
|---|
| Symbol | hupB |
|---|
| ID | 1185388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4203816 |
|---|
| End bp | 4204088 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637395070 |
|---|
| Product | DNA-binding protein HU-beta |
|---|
| Protein accession | NP_793497 |
|---|
| Protein GI | 28870878 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.612497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGT CGGAACTGAT TGATGCTATC GCTGCATCTG CTGATATCCC GAAAGCTGCT
GCTGGCCGTG CGCTGGACGC AGTGATCGAA TCCGTCACTG GCGCTCTGAA GGCTGGCGAC
TCGGTTGTTT TGGTTGGCTT TGGTACGTTC TCCGTGACTG ATCGTCCTGC TCGCATCGGT
CGCAATCCTC AGACCGGTAA GACGCTGGAA ATCGCTGCTG CTAAAAAACC AGGTTTCAAA
GCCGGTAAAG CTCTCAAAGA AGCTGTCAAC TAA
|
|---|
| Protein sequence | MNKSELIDAI AASADIPKAA AGRALDAVIE SVTGALKAGD SVVLVGFGTF SVTDRPARIG
RNPQTGKTLE IAAAKKPGFK AGKALKEAVN
|
|---|
| |