Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3700 |
Symbol | |
ID | 1185365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4172325 |
End bp | 4173146 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395047 |
Product | oxidoreductase, aldo/keto reductase family |
Protein accession | NP_793474 |
Protein GI | 28870855 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACAC TGGAATTGGC AGGCAACACC GTACCAGTGC TGGGTCAGGG CACCTGGCAC ATGGGTGAAA AAGGGCACCA GCGCTCGGCA GAAATCGCCG GTCTGTGCCT GGGCATCGAA CAGGGCCTGA CCCTGATCGA CACCGCCGAG ATGTACGCCG ATGGCGCCGC TGAAGAGATC GTCGGGCAAG CCATCGCAGG CCAGCGTGAC AAGGTCTTCG TGGTCAGCAA GGTCTATCCG CACAATGCCA GCAGTGCCGG TATTCCCGTC GCATGCGAAG CCAGCTTGCG CCGGATGAAC ACCGACTACA TCGACCTCTA TCTGCTGCAT TGGCCGGGCA ACTACCCGCT GACCGAGACC GTCGAGGCGT TCGAGCGTCT GCGTGAGGCC GGAAAGATCG GCGCATGGGG CGTGTCCAAC TTTGATGTCC GGGACATGAT CGAGTTGAAC AACCCGCGCT GCGCGACCAA TCAGGTGCTG TACAACCCGG AACAGCGCGG TATCGAGTTC GACCTCATGC CGTGGAGCGC AGACCGCCAC TTGCCGTTGA TGGCGTACTG CCCGATTGGC CAGGCCGGCG ATCTGCTTTA CCACCCTGCC CTGCATGAAA TTGCCAAACG CCATGAAGCA ACGCCAGCGC AGATCTCTCT GGCGTGGGTG CTGCGTCAGG ACAACCTGAT TGCCATCCCC AAGGCGACCA ACCCGGAGCA TATCCGCCTG AACATCGCGG CTGAGCAAAT TCGCCTCACC GAGCAGGATC TCGCTGATAT CGACCTGGCC TGGCCCGCAC CGACCCGCAA GGTGCCACTG GCGATGGTCT GA
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Protein sequence | MRTLELAGNT VPVLGQGTWH MGEKGHQRSA EIAGLCLGIE QGLTLIDTAE MYADGAAEEI VGQAIAGQRD KVFVVSKVYP HNASSAGIPV ACEASLRRMN TDYIDLYLLH WPGNYPLTET VEAFERLREA GKIGAWGVSN FDVRDMIELN NPRCATNQVL YNPEQRGIEF DLMPWSADRH LPLMAYCPIG QAGDLLYHPA LHEIAKRHEA TPAQISLAWV LRQDNLIAIP KATNPEHIRL NIAAEQIRLT EQDLADIDLA WPAPTRKVPL AMV
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