| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3661 |
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| Symbol | |
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| ID | 1185326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4127968 |
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| End bp | 4130346 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395008 |
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| Product | xanthine dehydrogenase, C-terminal subunit |
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| Protein accession | NP_793435 |
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| Protein GI | 28870816 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGC ATTCCTCCCC CCTCACCCAG GCCGACATGC TGGCCCTGTT TCAACAGGAC
CTGAGCACTG GCGTCGGCCG CAGCGTGAAG CACGACAGCG CCGACAAACA TGTGTCCGGC
GAAGCGGTGT ACATCGACGA TCGCCTTGAG TTTCCCAATC AACTGCACGT TTACGCGCGC
CTCTCGGACC GCGCCCATGC GCGCATCGTC AGCATTGATA CCGCGCCCTG CCATGCGTTT
GAAGGCGTAA GAATCGCGAT TACCCACCAA GACATTCCCG GCCTGAAAGA CATCGGCCCG
CTGCTGCCCG GCGACCCGTT GCTGGCCATC GACAAGGTGG AATTCGTCGG CCAGCCGGTG
CTTGCGGTTG CCGCGCGGGA TCTGGACGTC GCGCGTCAGG CAGCTATGGC GGCAATCATC
GAATACGAAG ACCTGGAGCC GGTGCTGGAT GTGGTTCAGG CCTTGCGTCA GAAGCATTTC
GTGCTCGACA GCCACACCCA CAAGCGCGGC GATTCGGCGA CGGCTCTGCA AGGCGCAACC
CACCGTTTGC AGGGCAACCT GCACATTGGC GGCCAGGAAC ATTTCTACCT GGAAACCCAG
ATCTCCTCGG TCATGCCGAC TGAAGACGGC GGCATGATTG TCTATTGCTC GACCCAGAAC
CCCACGGAAA TCCAGAAGCT GGTGGCTGAG GTGCTGAACG TGCCGATGAA CCGCATTGTG
GTCGATATGC GGCGCATGGG CGGTGGCTTC GGCGGCAAGG AAACTCAGGC CGCCAGCCCG
GCGTGCCTGT GCGCAGTGAT TGCGCGGCTG ACCGGTCAGC CGACCAAGAT GCGCCTGCAA
CGCTTCGAAG ACATGCAGAT GACCGGCAAG CGCCACCCGT TCTACATCGA ATACGACGTG
GGCTTTGACG ATAACGGTCG CCTGCAAGGC ATCCAACTGG ATCTGGCCGC CAACTGCGGC
TATTCGCCAG ACCTGTCGGC CTCGATTGTC GACCGCGCAA TGTTCCATGC CGACAACGCC
TATTACCTGG GCGAAGCAAC CATCAACGGC CATCGCTGCA AGACCCACAC GGCGTCCAAC
ACCGCGTACC GGGGCTTTGG CGGCCCGCAA GGCATGGTGG CCATCGAAGA AGTCATGGAC
TGTATCGCAC GTTTTCTGGG CAAGGACCCG TTGGCGGTCC GCAAGGCCAA CTACTACGGC
AAGACCGAAC GTAACGTCAC CCATTACTAC CAGACCGTCG AGCACAACCT GCTGGAAGAA
ATGACGGCGG ATCTGGAACA GAGCAGCCAG TACGCCGAGC GCCGCGAGGC CATCCGGGGT
TTCAACGCCA GCAGCCCGAT CCTGAAAAAA GGCCTGGCGC TGACGCCGGT AAAATTCGGC
ATCTCGTTCA CCGCCAGCTT TCTCAATCAG GCGGGGGCGC TGATCCACAT TTACACCGAC
GGCAGCATCC ACCTGAACCA CGGCGGCACC GAGATGGGCC AGGGTTTGAA CACCAAGGTC
GCGCAAGTCG TGGCTGAAGT GTTTCAAGTT GATATTGACC GCATTCAGAT CACCGCGACC
AACACCGACA AGGTGCCGAA CACCTCGCCG ACGGCGGCGT CCAGCGGCAC TGACCTGAAT
GGCAAGGCGG CGCAAAACGC CGCTGAAATT CTCAAGCAAC GTCTGGTTGA ATTTGCCGCG
CGGCATTACA ACGTGGCAGA AACCGAGGTC GAGTTTCGTA ACGGTCATAT ACGGATCGGT
GAGATTGTCC TGCCCTTTGC CGAGTTGGCT CAACAGGCAT GGATGGGTCA GGTGTCGCTG
TCCAGTACCG GTTATTACAA GACGCCGAAG ATCTTCTACG ACCGCAGCCA GGCGCATGGC
CGGCCGTTCT ATTACTTCGC GTTCGGTGCG GCCTGCGTCG AGGTGATCGT CGACACCCTG
ACCGGTGAAT ACAAGACTTT GCGCACTGAC ATCCTGCATG ACGTCGGCGC GTCGCTGAAC
CCGGCCATCG ACATCGGTCA GGTCGAAGGC GGCTACATTC AGGGCGCTGG CTGGCTGACC
ACCGAAGAGC TGGTGTGGAA CGACAAAGGC AAACTGATGA CCAGCGGCCC GGCGTCTTAC
AAGATCCCGG CGGTGGCCGA CATGCCGCTG GATTTGCGGG TCAAGCTGGT GGAGAACCGC
AAGAACCCGG AAGACACGGT GTTCCATTCC AAGGCCGTGG GCGAACCGCC GTTCATGCTC
GGCATAGCCG CGTGGTGCGC AATCAAGGAC GCCGTGGCAA GCCTGGGTGA TTATCGCCAT
CAACCGAACA TCGACGCCCC GGCGACGCCG GAAAAGGTGT TGTGGGGGTG TGAGCAGATG
CGTCAGTTGC ACACAGCAGA GACCCATGAG TATGAATAA
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| Protein sequence | MSEHSSPLTQ ADMLALFQQD LSTGVGRSVK HDSADKHVSG EAVYIDDRLE FPNQLHVYAR
LSDRAHARIV SIDTAPCHAF EGVRIAITHQ DIPGLKDIGP LLPGDPLLAI DKVEFVGQPV
LAVAARDLDV ARQAAMAAII EYEDLEPVLD VVQALRQKHF VLDSHTHKRG DSATALQGAT
HRLQGNLHIG GQEHFYLETQ ISSVMPTEDG GMIVYCSTQN PTEIQKLVAE VLNVPMNRIV
VDMRRMGGGF GGKETQAASP ACLCAVIARL TGQPTKMRLQ RFEDMQMTGK RHPFYIEYDV
GFDDNGRLQG IQLDLAANCG YSPDLSASIV DRAMFHADNA YYLGEATING HRCKTHTASN
TAYRGFGGPQ GMVAIEEVMD CIARFLGKDP LAVRKANYYG KTERNVTHYY QTVEHNLLEE
MTADLEQSSQ YAERREAIRG FNASSPILKK GLALTPVKFG ISFTASFLNQ AGALIHIYTD
GSIHLNHGGT EMGQGLNTKV AQVVAEVFQV DIDRIQITAT NTDKVPNTSP TAASSGTDLN
GKAAQNAAEI LKQRLVEFAA RHYNVAETEV EFRNGHIRIG EIVLPFAELA QQAWMGQVSL
SSTGYYKTPK IFYDRSQAHG RPFYYFAFGA ACVEVIVDTL TGEYKTLRTD ILHDVGASLN
PAIDIGQVEG GYIQGAGWLT TEELVWNDKG KLMTSGPASY KIPAVADMPL DLRVKLVENR
KNPEDTVFHS KAVGEPPFML GIAAWCAIKD AVASLGDYRH QPNIDAPATP EKVLWGCEQM
RQLHTAETHE YE
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