| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3660 |
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| Symbol | |
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| ID | 1185325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4126521 |
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| End bp | 4127975 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395007 |
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| Product | xanthine dehydrogenase, N-terminal subunit |
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| Protein accession | NP_793434 |
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| Protein GI | 28870815 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
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| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.807153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCAGT TCCTTTTGAA CCAAGAGCTA AAAACCGAGC GCAGCCTGAA TCCGAACATG
ACCGTGCTGA CCTACCTGCG AGAGCAGGCA CACAAGCCCG GTACCAAGGA AGGTTGCGCC
AGTGGTGACT GTGGCGCCTG TACGGTGGTC GTCGGCGAGC TGCACAGCGA CGCAGACGGC
CAGCAGCAAC TGCGCTATCG CAGCGTCAAT TCATGCCTGA CCTTTGTCGC CTCGCTGCAC
GGCAAGCAGT TGATCAGCGT TGAAGACCTC AGGCACCAGG GCCAGTTGCA CAGCGTGCAA
AAGGCGATGG TCGAATGCCA CGGCTCGCAA TGCGGCTTTT GCACGCCTGG GTTTGTGATG
TCGCTGTTTG CCCTGCAAAA AAACAGCAGC GACGCCAACG CGCATCAGGC CCATGAAGCA
TTGGCCGGCA ACTTGTGCCG CTGTACCGGT TATCGACCGA TTCTGGCCGC TGCCGAGCAG
TCTTGCAGTC AGCGTGTGCC AGACCAGTTC GATCAGCGTC AGGCGCAGAC TATAGAGCGC
CTGCGCGCGA TCACGCCAAG TCAGACCGGC GAACTCAATG ATGGTGAAAA GCACTGCCTG
ATTCCGCTGA CCGTGGCCGA CCTCGCCGAT CTGTATCAGG CCAACCCGCA AGCGCGTCTA
TTGGCGGGCG GCACCGATCT GGCGCTGGAA GTCACACAAT TCCACAAAGC ACTGCCCGCG
ATGATCTACG TTGGACATAT CGCCGAAATG AAACGTGTCG AACGCTTCGA CGACCGTCTG
GAGATCGGTG CAGCCACGCC ACTGACCGAT TGCTACGCAG CGCTGAAGGC TCAATACCCG
GACTTCGGCG AACTGCTGCA GCGCTTTGCT TCGCTGCAGA TCCGCAATCA AGGCACGCTG
GGCGGCAACA TCGGCAATGC CTCCCCCATC GGCGACTCCC CGCCGCTGCT GATCGCCCTC
GGTGCACAGA TCGTGCTGCG TAAAGGCGAC ACCCGGCGCA CGCTGGCGCT GGAAGATTAT
TTCATCGACT ACAAGGTTAC CGCCCGCCAG CCAGGCGAGT TCATCGAGAA GATCATCGTG
CCGACCGCTA CCCCCCGGCA GGTCTTCCGG GCCTATAAAG TCTCCAAGCG CCTGGATGAC
GATATTTCTG CGGTGTGTGC GGCGTTTCGT CTGAATATAG AAGGCGGCGT GATCCGCGAA
GCCCGCGTGG CCTACGGCGG CATGGCGGCG ATCCCGAAAC GTGCAGCGAA CTGCGAGCAG
GCCTTGGTCG GCCAGCCATG GAACAATGAA ACCGTCGAAC AGGCCTGCGC TGCGCTGAAA
GAAGATTTCA GCCCACTGTC GGACTTTCGC GCCAGCAAGG AGTACCGCCT GTTGAGCGCG
CAGAACCTGC TGCGCAAATA TTTCATCGAA TTGCAGACCC CGGCCATCGC AACGCGGGTG
ACCGACTATG TCTGA
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| Protein sequence | MIQFLLNQEL KTERSLNPNM TVLTYLREQA HKPGTKEGCA SGDCGACTVV VGELHSDADG
QQQLRYRSVN SCLTFVASLH GKQLISVEDL RHQGQLHSVQ KAMVECHGSQ CGFCTPGFVM
SLFALQKNSS DANAHQAHEA LAGNLCRCTG YRPILAAAEQ SCSQRVPDQF DQRQAQTIER
LRAITPSQTG ELNDGEKHCL IPLTVADLAD LYQANPQARL LAGGTDLALE VTQFHKALPA
MIYVGHIAEM KRVERFDDRL EIGAATPLTD CYAALKAQYP DFGELLQRFA SLQIRNQGTL
GGNIGNASPI GDSPPLLIAL GAQIVLRKGD TRRTLALEDY FIDYKVTARQ PGEFIEKIIV
PTATPRQVFR AYKVSKRLDD DISAVCAAFR LNIEGGVIRE ARVAYGGMAA IPKRAANCEQ
ALVGQPWNNE TVEQACAALK EDFSPLSDFR ASKEYRLLSA QNLLRKYFIE LQTPAIATRV
TDYV
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