Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3600 |
Symbol | |
ID | 1185265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4060605 |
End bp | 4061252 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394952 |
Product | oxidoreductase, molybdopterin-binding protein |
Protein accession | NP_793379 |
Protein GI | 28870760 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCACCG GCTGTAATCT GCAGGACGGT GATCAGGTGG ACAAGGTGCT GTGGGCCATG TCGCGCTGGA ACGACCGGGT TCAGGCCTGG CTGTTCAACG GCCAGAAACT GGCCCCGACT TATACCAAGG CGCAGTTGAC CAACCCGTTC CCGTTCAATG CGTTTTACCC TGAATACAAC GTGCCTGAGC TGGAGCTTGC CGAGTATCGG CTGGCGGTGT CCGGGCTGGT ACGCGACAAG CAGCCGTGGA CGATAGACGC GCTGCGCAAA TTGCCGCAAC GCACGGACAT CACGCGGCTG ATCTGCATTG AAGGCTGGAG CGCGATAGGG CAGTGGGGCG GTGTGCCGCT GAAAACGTTT CTGGAGTACA TCGGAGCGGA TACTACGGCG CGCTTCGTCG GCTTCAAGTG CGCCGACCGC TATTACTCAA GTTTGGACAT GCCCACCGCG CTGCACCCGC AGACCCTGCT GGCGCTGGAC TTCGGCGAAG TCGCGCTGCC TCCGGACTAC GGTTACCCGC TGCGCGTGCG GGTGCCGACC AAACTGGGCT TCAAGAACCC CAAGCACATC GTCGAGATTT TCGTCAGTAA CGAAAACCCC GGCGGGTACT GGGAAGATCA GGGCTACAAC TGGTTCAGCG GGATCTAG
|
Protein sequence | MLTGCNLQDG DQVDKVLWAM SRWNDRVQAW LFNGQKLAPT YTKAQLTNPF PFNAFYPEYN VPELELAEYR LAVSGLVRDK QPWTIDALRK LPQRTDITRL ICIEGWSAIG QWGGVPLKTF LEYIGADTTA RFVGFKCADR YYSSLDMPTA LHPQTLLALD FGEVALPPDY GYPLRVRVPT KLGFKNPKHI VEIFVSNENP GGYWEDQGYN WFSGI
|
| |