Gene PSPTO_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3574 
Symbol 
ID1185239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4030399 
End bp4032519 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content60% 
IMG OID637394926 
ProductTonB-dependent siderophore receptor, putative 
Protein accessionNP_793353 
Protein GI28870734 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCATCT CCTCCCAACG CCCTCGCCGT CCCGGCCCTT TTCTGTTGTC TGCGCTGTCT 
CTGGCAATGT TCTCCAGCGG TCCAGTGCAT GCAGCAGAAA CCGCCACGCT GCCTGCCACG
CAGGTTTCCG CCGCGGCCTC CGAAGCCTCG GAAGGCTACA ACGCCAAAAG CACCAGCACC
GCGAGCAAGA GCGATGTGCC TATCAAGGAA GAGGCACAAT CGGTCAACGT CGTCACGCCA
CAGACGATCG CCGATTACAA CGTGCGCTCG CTGGACGACG CCATGAAATT TGTCAGCGGC
GTCAGTCAGG GTAATACCTT GGGCAACACC AAGGACTCGG TGATCAAGCG CGGTTTCGGC
ACCAACGATG ACGGCTCGAT CCTGCGCGAT GGCGTACGTT CGGTGGTGTC GAAGAATTTC
GGCGCGACCA CCGAGCGTGT CGAGGTGCTC AAAGGCCCTG CATCGCTGCT GTACGGGGCG
ATGGAACCGG GCGGCGTGAT CAACGTGATC AGCAAACAGC CACAGTACGT GCAAAGCACC
ACTCTGAGCG GTTCTGCGTA CAGTGAAGGT GGCGGCAGCT TCAGCGTCGA CACCACCGGC
CCGCTGGGCG ATTCCGGGCT GGCCTACCGG CTGGTGGCTG AACGTCAGAG CGAGGACTAC
TGGCGTAACT ACGGCGTTGA CCAGCACACG CTGATCGCGC CATCGCTGTC CTGGACCGGT
GAGCGCGCCA GCCTGACCCT GGCCTACGAA TACAACGATT ACATCAGCCC GTTCGACCGC
GGCACTGTTT TCACCGGCGG CCACCCGGCA GACATCAGCT ATGACAAGCG TCTCGACGAG
AAGTGGTCAA ACACGGTCGG CATCAGCGAA ACCGCAACCG CACGTTTCGA GTATCAGCTC
AGCGACGACT GGAAAACCCG CCTGACCTAT GGCTGGAACA ATGACCGCTA CAGCCTCTCG
ATAGCCCAGC CCAGCACTCT GTCGAGCAGC GGCGTGTTGC GTCGTCAGGC CAACGGCGGC
CACTACGATT ACGAAACCCG TTACGCCAGC TGGGACTTCA TCGGCAAGCA GGACATTCTC
GGCCAGCAGC ACGATCTGCT GATCGGCGCC GAGCAGGAAG ACTCCGACAA GTATCGCGGC
AAGACTTACC GCAACACGGC TCAAAACGGC TTCAATATCT TCTCGCCGGC TTATGGCAGC
CTGGCCGAGC CCAGTGTCGT CAGCGCGGCG AACAGCAACC TGAGCAATCA GCTGACTTCG
TCTTCGCTGT ACCTCAAGGA CAACTGGCAC CTTAACGATC GCTGGATTCT GGTGCTTGGC
GGCCGTTATC AGCACTATGA CCAGTACATC AAACAAGGCC TTGGTGCCAG CCGCGTCACT
AACCTGGACA AAAACGACGA TGTGTTCCTG CCGATGGCCG GCCTGGTGTT CAAGGTCAAT
GAAGACCTGT CGCTGTACGG CAACTACAGC CGTTCGTTCG TACCCAATGA TGACGTGAAC
GACGATGGCA CGACCTTCGA CCCGGAAGAA GGTCGCAGCT ATGAAGTTGG CGCCAAATAC
GCACTTGCGC CGGAACTCAA CTTCAACCTT GCAGTGTTCG ATATCGAGAA GAAAAACGTC
GTTACCCCGA CCGGCGTTAC CGGCGTCAGC GAAGCGGCGG GCAAGGTGGG CTCGCAAGGC
GTAGAGCTGG ACGTGACCGG GCGCATCGCC GAGCGTTGGG ATATGATCGG CACTTACGCC
TACACCCACA CCGAAGTGCT CGATGACCCA AGCAACAAGG GCAATCGTTT GAGTCAGGCG
CCGAAACATA CCGCCAGCCT GTACCTCACC CACCACCTGC AGATTCCTTC GGACCTGGGC
GAATGGCATG CCGGTGGTGG CGCGCGTTAC GTTGGCGAGC GCGCTGGCGA CGATGCCAAC
ACCTTCTATA TGAGCAGCTA CACCGTAGCC GATGCGTTTT TGCGCTGGGA CGTGCCGATG
GCCGGGTATA AAACCCGCCT GCAATTGAAC GTGGACAACC TGTTTGACAA GCAGTACTAC
CCGTCAAGCA CCGGTAGCCA GTTGCAGGTC AACGTGGGCG AGCCGCGCAC CGCACGCTTG
AGCGCCAGCG TCACGTTTTA A
 
Protein sequence
MSISSQRPRR PGPFLLSALS LAMFSSGPVH AAETATLPAT QVSAAASEAS EGYNAKSTST 
ASKSDVPIKE EAQSVNVVTP QTIADYNVRS LDDAMKFVSG VSQGNTLGNT KDSVIKRGFG
TNDDGSILRD GVRSVVSKNF GATTERVEVL KGPASLLYGA MEPGGVINVI SKQPQYVQST
TLSGSAYSEG GGSFSVDTTG PLGDSGLAYR LVAERQSEDY WRNYGVDQHT LIAPSLSWTG
ERASLTLAYE YNDYISPFDR GTVFTGGHPA DISYDKRLDE KWSNTVGISE TATARFEYQL
SDDWKTRLTY GWNNDRYSLS IAQPSTLSSS GVLRRQANGG HYDYETRYAS WDFIGKQDIL
GQQHDLLIGA EQEDSDKYRG KTYRNTAQNG FNIFSPAYGS LAEPSVVSAA NSNLSNQLTS
SSLYLKDNWH LNDRWILVLG GRYQHYDQYI KQGLGASRVT NLDKNDDVFL PMAGLVFKVN
EDLSLYGNYS RSFVPNDDVN DDGTTFDPEE GRSYEVGAKY ALAPELNFNL AVFDIEKKNV
VTPTGVTGVS EAAGKVGSQG VELDVTGRIA ERWDMIGTYA YTHTEVLDDP SNKGNRLSQA
PKHTASLYLT HHLQIPSDLG EWHAGGGARY VGERAGDDAN TFYMSSYTVA DAFLRWDVPM
AGYKTRLQLN VDNLFDKQYY PSSTGSQLQV NVGEPRTARL SASVTF