Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3566 |
Symbol | csrA-3 |
ID | 1185231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4024829 |
End bp | 4025017 |
Gene Length | 189 bp |
Protein Length | 62 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637394918 |
Product | carbon storage regulator |
Protein accession | NP_793345 |
Protein GI | 28870726 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.054152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATAC TCACTCGCAA AGTAGGCGAA AGCATAAACA TCGGTGACGA GATCACCGTC ACGATTCTTG GCGTTCAAGG GCTTCAGGTC CGCCTGGGCA TCAATGCACC CAAAAATGTT TCAGTGCATC GTGAAGAAAT CTACAAACGT ATCCAGGCGG AACTGGCTCC AAACCAGGAC CCACAATAA
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Protein sequence | MLILTRKVGE SINIGDEITV TILGVQGLQV RLGINAPKNV SVHREEIYKR IQAELAPNQD PQ
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