Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3535 |
Symbol | |
ID | 1185200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3990753 |
End bp | 3991970 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394888 |
Product | glycosyl transferase, group 1 family protein PslH |
Protein accession | NP_793315 |
Protein GI | 28870696 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.937729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATTC TATGGACGCT CCCCTATCTG CCGTGGCCGA CCACCAGTGG CGGCAAGACC CGGGAATACC ATTTGCTGCG CAACCTGGCA GCGCGCGGCC ACCGTATTAC CCTGCTGGTA CAGTCCAAGA CTGCCCTGGA CGAAAACACT CGCTCGGCGC TGGAGCCCTG GCTGGAGCGC CTGATCGTGA TCGAACGTCG CCCGCTGTCG AGCCTGCGCA CCCTGCTGGC CGTGGCGTTC GCACCGGCGC CAATGCTCGC CAGCGTCAAC GGTTACGCGC CGAAACTGGA AAAAGCCTTC GAGCAGTTGC TTGCGCAACA CTGGGACATC ATTCAGTTGC AACACACCTA CTCCTTTCAG CCATTCGAGC GCGCGCTGAA GCGCTCGGGC AAGCCGTTCG TGCTCACCGA GCACAACGTC GAGTCCGATC TGGGTGCGGC CAGTTACGAC CGCCTGCCAC GCTGGGCCAA TGCGTTCGCG GTATACGATC GCTGGCGCTA CCGACGCTGG GAAACCCGCG TGTTTCGCCA GACCGGCGAA CTGATCGCGG TCACCGAAGA CGACGCCAAA GTGCTGTCGC GCCTCAGCGG CAGGGCCACC TCCTATGTGG TCAACAGTGT CGATTGCGGC TACTACGCCA GCGTTCACGC TGACCGCAAC AGCCGTCGCC TGCTGTTCAT CGGCAACTAC GAGTACGGCC CCAACATCGA CGCCATCGAA TGGGCGCTGG ACGAAATCAT GCCGCAGGTC TGGGCCCAGG CACCTGATGT GAGCTTTGCC ATTGGCGGCT TTGGCATGCC TCAAACCTGG CGTGAACGCT GGCCTGACCC GCGCATCGAG TGGCTGGGTT TTGTACCGGA CTTGCGCACC CTGCAGGCCG GCGCTGCGAT GTTCTTCGCG CCACTGCGCC AAGGCGGCGG CTCGAAACTC AAGACCCTTG AAGCCATGGC TGCCGGTCTG CCGGTGGTGA CCACCGCGCA GGGCGTTTCC GGCCTGTCGG TCACCAATGG TGAACATTAT CTGGGCAGCG AAGACGCGTC CGGGCTGGCA ACACTGATCG TCGAATACGC CGACAAACCG GCACGGCTCG AACAGATCGG CGAGGCTGGC CGCGTTTATG TACGCGCCCG GCACGACTGG TCTGTGTCGG CCGCGCAACT GGAAGTCATC TACACCCGTT TTTCGCAACC CAAGCAAGGA TCGCGCTCAT GCGTATAG
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Protein sequence | MRILWTLPYL PWPTTSGGKT REYHLLRNLA ARGHRITLLV QSKTALDENT RSALEPWLER LIVIERRPLS SLRTLLAVAF APAPMLASVN GYAPKLEKAF EQLLAQHWDI IQLQHTYSFQ PFERALKRSG KPFVLTEHNV ESDLGAASYD RLPRWANAFA VYDRWRYRRW ETRVFRQTGE LIAVTEDDAK VLSRLSGRAT SYVVNSVDCG YYASVHADRN SRRLLFIGNY EYGPNIDAIE WALDEIMPQV WAQAPDVSFA IGGFGMPQTW RERWPDPRIE WLGFVPDLRT LQAGAAMFFA PLRQGGGSKL KTLEAMAAGL PVVTTAQGVS GLSVTNGEHY LGSEDASGLA TLIVEYADKP ARLEQIGEAG RVYVRARHDW SVSAAQLEVI YTRFSQPKQG SRSCV
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