Gene PSPTO_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3535 
Symbol 
ID1185200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3990753 
End bp3991970 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content63% 
IMG OID637394888 
Productglycosyl transferase, group 1 family protein PslH 
Protein accessionNP_793315 
Protein GI28870696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.937729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTC TATGGACGCT CCCCTATCTG CCGTGGCCGA CCACCAGTGG CGGCAAGACC 
CGGGAATACC ATTTGCTGCG CAACCTGGCA GCGCGCGGCC ACCGTATTAC CCTGCTGGTA
CAGTCCAAGA CTGCCCTGGA CGAAAACACT CGCTCGGCGC TGGAGCCCTG GCTGGAGCGC
CTGATCGTGA TCGAACGTCG CCCGCTGTCG AGCCTGCGCA CCCTGCTGGC CGTGGCGTTC
GCACCGGCGC CAATGCTCGC CAGCGTCAAC GGTTACGCGC CGAAACTGGA AAAAGCCTTC
GAGCAGTTGC TTGCGCAACA CTGGGACATC ATTCAGTTGC AACACACCTA CTCCTTTCAG
CCATTCGAGC GCGCGCTGAA GCGCTCGGGC AAGCCGTTCG TGCTCACCGA GCACAACGTC
GAGTCCGATC TGGGTGCGGC CAGTTACGAC CGCCTGCCAC GCTGGGCCAA TGCGTTCGCG
GTATACGATC GCTGGCGCTA CCGACGCTGG GAAACCCGCG TGTTTCGCCA GACCGGCGAA
CTGATCGCGG TCACCGAAGA CGACGCCAAA GTGCTGTCGC GCCTCAGCGG CAGGGCCACC
TCCTATGTGG TCAACAGTGT CGATTGCGGC TACTACGCCA GCGTTCACGC TGACCGCAAC
AGCCGTCGCC TGCTGTTCAT CGGCAACTAC GAGTACGGCC CCAACATCGA CGCCATCGAA
TGGGCGCTGG ACGAAATCAT GCCGCAGGTC TGGGCCCAGG CACCTGATGT GAGCTTTGCC
ATTGGCGGCT TTGGCATGCC TCAAACCTGG CGTGAACGCT GGCCTGACCC GCGCATCGAG
TGGCTGGGTT TTGTACCGGA CTTGCGCACC CTGCAGGCCG GCGCTGCGAT GTTCTTCGCG
CCACTGCGCC AAGGCGGCGG CTCGAAACTC AAGACCCTTG AAGCCATGGC TGCCGGTCTG
CCGGTGGTGA CCACCGCGCA GGGCGTTTCC GGCCTGTCGG TCACCAATGG TGAACATTAT
CTGGGCAGCG AAGACGCGTC CGGGCTGGCA ACACTGATCG TCGAATACGC CGACAAACCG
GCACGGCTCG AACAGATCGG CGAGGCTGGC CGCGTTTATG TACGCGCCCG GCACGACTGG
TCTGTGTCGG CCGCGCAACT GGAAGTCATC TACACCCGTT TTTCGCAACC CAAGCAAGGA
TCGCGCTCAT GCGTATAG
 
Protein sequence
MRILWTLPYL PWPTTSGGKT REYHLLRNLA ARGHRITLLV QSKTALDENT RSALEPWLER 
LIVIERRPLS SLRTLLAVAF APAPMLASVN GYAPKLEKAF EQLLAQHWDI IQLQHTYSFQ
PFERALKRSG KPFVLTEHNV ESDLGAASYD RLPRWANAFA VYDRWRYRRW ETRVFRQTGE
LIAVTEDDAK VLSRLSGRAT SYVVNSVDCG YYASVHADRN SRRLLFIGNY EYGPNIDAIE
WALDEIMPQV WAQAPDVSFA IGGFGMPQTW RERWPDPRIE WLGFVPDLRT LQAGAAMFFA
PLRQGGGSKL KTLEAMAAGL PVVTTAQGVS GLSVTNGEHY LGSEDASGLA TLIVEYADKP
ARLEQIGEAG RVYVRARHDW SVSAAQLEVI YTRFSQPKQG SRSCV