Gene PSPTO_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3528 
Symbol 
ID1185193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3981164 
End bp3982141 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content58% 
IMG OID637394881 
ProductIS52, transposase 
Protein accessionNP_793308 
Protein GI28870689 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.418337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAAA CCTTCTCCGA ACTCGAATAT ACCGGCAAGA AAAAGCAGAC TCGCCGAGAT 
CGCTTCCTGG CTGACCTTGA ACAGTTGGTG CCCTGGGCCC AGCTGGAGGC GCAAGTGGCG
CCGTTTTATA GCAACACCGC AGGCAAGCGC GGACGCCCTG CGATAGGGGT GTCGCGCATG
TTGCGCATGT ACGTCGTGCA GCAGTGTTTC GGTTTCTCCG ATGAAGGTTG CGAAGATGCC
GTCTACGACA GCCAGGCCAT CCGCGGTTTT ATGGGTATCG ACCTGGGTCG CGAGTCGGCA
CCGGATGCCA CCACCTTGCT GCGTTTTCGC CGCTTGCTGG AAACCCATCA GCTAACGCGG
CTGCTGTTTG AAACGATTAA CCAGCATCTG GCCAGCCGGG GGCTGCTGCT CAAGGAAGGC
ACTATCGTCG ACGCTACCCT GATCGCCGCG CCGCCCTCGG TCAAGAACCG AGAAGGCAAG
CGTGATCCTG AGATGCATCA GGCCAGGAAA GGCAATCAAT GGCACTTCGG GATGAAGGCC
CACATTGGTG TAGACGCCAC GTCGGGGCTG GTGCACAGCG TAGTAGGGAC GGCCGCTAAC
GTGGCGGATG TCACCCAGGT TGGCCAGTTG CTGCACGGTG ACGAAACCTA TGTTTCGGGT
GACGCTGGAT ACACCGGTGC GGCCAAGCGA CCGGAGCATG CTGAACGGGA CGTTATCTGG
TCGATTGCAG CACGGCCAAG CAGTTACAAG CAGCACGGCG AAGGCAGCGT GCTGTATCGG
GTCAAGCGTA AAATTGAATA TGCCAAGGCG CAACTGCGCG CCAAGGTCGA GCACCCCTTC
CAGGTAATCA AGGTGCGCTT CAATCATCGC AAGGTTCGCT ACCGTGGGCT GGAAAAGAAT
ACAGCGCAGT TGTTCAGTTT GTTTGGGTTG GCCAATCTGA TGCTGGCCAA GCGGTATTTG
CAACAGGCGG CAGGATAA
 
Protein sequence
MQKTFSELEY TGKKKQTRRD RFLADLEQLV PWAQLEAQVA PFYSNTAGKR GRPAIGVSRM 
LRMYVVQQCF GFSDEGCEDA VYDSQAIRGF MGIDLGRESA PDATTLLRFR RLLETHQLTR
LLFETINQHL ASRGLLLKEG TIVDATLIAA PPSVKNREGK RDPEMHQARK GNQWHFGMKA
HIGVDATSGL VHSVVGTAAN VADVTQVGQL LHGDETYVSG DAGYTGAAKR PEHAERDVIW
SIAARPSSYK QHGEGSVLYR VKRKIEYAKA QLRAKVEHPF QVIKVRFNHR KVRYRGLEKN
TAQLFSLFGL ANLMLAKRYL QQAAG