Gene PSPTO_3505 details

Gene Information

• Locus tag: PSPTO_3505
• ID: 1185170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3957995
• End bp: 3958534
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637394858
• Product: cytochrome b561, putative
• Protein accession: NP_793285
• Protein GI: 28870666
• COG category: [C] Energy production and conversion
• COG ID: [COG3038] Cytochrome B561

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.437089
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATGCAC CGACCTCTCA ACGCTACACC GCAAAGGCCA GATGGCTGCA CTGGATCATG 
GCCGCACTGA TTGTGCTGGC ATACACCCTG ATTCTGAGCC GCACGCAGTT CGGAAAAGGC 
TCCGAGTACC GCACGCTGGT GGTACAGAGT CACTTCTGGG TGGGCATTGT GGTGCTGGTG 
CTGGCGTTTT TTCGCGTTGC CGAACGGCGC CGTCAGCGCC CGCCCGGCAT AACGCCGCCG 
CTCGAAGGGG TGTTGCGCGC AGCCGCGACC CTGTCGCACT ACGCGCTGTA TGCGTTCCTG 
TTTACTCAGC CGTTACTGGG CCTGCTGACG GTGATGGTGG AAAAAGGCTC CCTGCCTATC 
CCGCTCACCG ACCTGCAAAT ACCCTGGCCC TTGCCGATCT CGGACCACAC GGCCGAGTAT 
TTCGAAGACC TGCACAAGCT GCTGGGCAAA ATCTTCTACT ACGTCATCGG CTTGCATGTC 
GTCGCCGCGC TTTGGCACCA CATCGTGCGC AAGGACAACA CCCTCAAGCG CATGCTGTAA 

 

Protein sequence

MDAPTSQRYT AKARWLHWIM AALIVLAYTL ILSRTQFGKG SEYRTLVVQS HFWVGIVVLV 
LAFFRVAERR RQRPPGITPP LEGVLRAAAT LSHYALYAFL FTQPLLGLLT VMVEKGSLPI 
PLTDLQIPWP LPISDHTAEY FEDLHKLLGK IFYYVIGLHV VAALWHHIVR KDNTLKRML