| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3462 |
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| Symbol | |
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| ID | 1185127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3904401 |
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| End bp | 3906587 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394815 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | NP_793242 |
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| Protein GI | 28870623 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACCT CATCGATCCC GATGCGCCTT ACGTTGCTCG CTTTTTGCTG TTCCATGGGT
TCTCCGGCCT GGGCCGCTAC GGCGGCTGCC AGTCAGCAGG ACGGGCCGAT GGTCTTGGGC
GAGACTGACA TCAGCGCCGA CAAGGCCGAC CCGCATGCGC TGTCGCCCGT GTACGCAGGC
GGGCAGGTGG CTCGCGGCGG GCAGCTTGGC GTGCTGGGCA ATGCCGACAT CATGGATGTG
CCGTTCACCA TGACCAGCTA CACCGAACAA TTGATCGAGG ACCAACAGGC CGAAGACGTC
GGCGATGTAC TGCTCAATGA TGCGTCGGTG CGCCAGTCAA GCGGCTATGC CAACGCCTCG
AAGATCTTCG TCATTCGTGG CCTCAAGCTG ACCACCGACG ATATTTCCTA TAACGGCCTC
TACGGTGTGC TGCCGCGCCA GATCATCTCG ACCGATGCGC TGGAGCGGGT TGAAGTGTTC
AAAGGCCCCA ATGCCTTCAT CAACGGCGTC ACCCCGACCG GCTCCGGGAT TGGCGGCGGC
GTCAACCTGC AGCCCAAGCG TGCACAGGAC ACACCGACGC GGCGTTTTAC CACCGACATC
AGCAGCGATG GCCGGATCGG CGAGCATCTG GACCTCGGCC AGCGCTTTGG CGAGGGCAAT
CGTTTCGGTG CGCGCCTGAA TCTGTCTCAG CGCGAAGGCG AAACCGGCGT TGAGGACGAA
GAGCATCGCA GCAAGCTGTT TGCCCTGGGG CTTGATTATC GGGGTGACAA CTTCCGACTT
TCCGGCGATT TTGCTTACCA GAAGCAGCGC ATCAACCAGA GCCGCAACAC GGTATTCGTC
GGCAGCGGCC TGACCCGCGT GCCGCATGCG CCGGATGCCG ACACCAATTA CGCGCCGAAC
TGGACCTGGA CTGAAACCGA AGACACCTTC GGCATGAGCC GCGCCGAGTA CGACCTCAAT
GACGACTGGA CGCTGTACGC CGCAGCCGGT GCCAAGCACA CCCGTGAAAA CGGAATCTAC
GGCTCGCCGA CCATCAACGA CGCCGCAGGC AACATCACCG CGTCACCGTC TTCGATCCCG
CACGACGAAG ACAACAAGAC GGCCATGGCC GGCATCAACG GCAAGCTGCA GACCGGCGCG
GTCAGTCATA AGGTCAACGT CGGCCTGTCC GGCATCTGGA CCGAGCAGCG CAGTGCCTTT
CTGTTTGGCG GCCCTGCGAG CAGCAACCTA TACGACCCCG TTGAAACAAC GCGTCCTGCG
CTGGACAGCT TCTCGGGCGG TGACCTCAGT GATCCGGGCA TTATCGGCAA GAGCCGCATG
CGCAGCGTAG CGTTCTCCGA TACCTTGGGT TTTTTCGATG ACCGCCTGTT GTTGACGGCA
GGCCTGCGTC GCCAGCAACT GCGTGTCGAG GGTTATGACT ACGGCAGTGG CCCGCGCAAC
GCGCTGTATG ACGAGGCGAT TACCACGCCG GTCTATGGGT TGGTGTTCAA GCCCTGGCGC
TATGTGTCGT TCTATGCAAA CCGCATTGAA GGTCTGGCGC AGGGGCCGAC GGCGCCGAGC
ACAGTGACGA TCAACCCCGG CGAGGTGTTC GCACCGGCGC GCTCCAAACA GGTAGAAGCC
GGCGTGAAGC TGGACATGGG AACGTTCGGC GCAAGCCTGG GTGCGTACCG CATCGAACAG
CCGACTGACG GCTATCAGAT TCAGGATGGA AGCGGAACGC GCTACGTCCG CGAGGGCGAA
CAGCGCAACC GTGGCGTGGA AATGAACGTG TTCGGCGAGC CTGTCAGCGG CCTGCGTCTG
CTGGCCGGTC TGACCCTGAT GGACACCGAG GTGAGCGGTA CGTCCGGTGG CAGCAACGAT
GGCAACAGGG CCATTGGTGT GCCGACCTTC CAGTTCAATG CCGGTGCCGA CTGGGATGTG
CCAGGCATCG CAGGCGCTGC CATCAATGCG CGCATGCTGC GTACCGGTGG ACAGTATATC
GATGCCGCAA ACACCCTGAG CATTCCCACC TGGAACCGTT TCGATCTGGG CGCACGCTAC
ACCTTCAACG TGGCGCAAAA GGACGTCACA CTGCGTGCCA ATGTCGAAAA CCTGATGAAC
AAGGATTATT GGGAATCGGC CTACGGAGGC TATCTGACTC AGGGCGAGCC ACGCACCTTG
AAGCTGTCCG GTACCCTCGA TTTCTGA
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| Protein sequence | MHTSSIPMRL TLLAFCCSMG SPAWAATAAA SQQDGPMVLG ETDISADKAD PHALSPVYAG
GQVARGGQLG VLGNADIMDV PFTMTSYTEQ LIEDQQAEDV GDVLLNDASV RQSSGYANAS
KIFVIRGLKL TTDDISYNGL YGVLPRQIIS TDALERVEVF KGPNAFINGV TPTGSGIGGG
VNLQPKRAQD TPTRRFTTDI SSDGRIGEHL DLGQRFGEGN RFGARLNLSQ REGETGVEDE
EHRSKLFALG LDYRGDNFRL SGDFAYQKQR INQSRNTVFV GSGLTRVPHA PDADTNYAPN
WTWTETEDTF GMSRAEYDLN DDWTLYAAAG AKHTRENGIY GSPTINDAAG NITASPSSIP
HDEDNKTAMA GINGKLQTGA VSHKVNVGLS GIWTEQRSAF LFGGPASSNL YDPVETTRPA
LDSFSGGDLS DPGIIGKSRM RSVAFSDTLG FFDDRLLLTA GLRRQQLRVE GYDYGSGPRN
ALYDEAITTP VYGLVFKPWR YVSFYANRIE GLAQGPTAPS TVTINPGEVF APARSKQVEA
GVKLDMGTFG ASLGAYRIEQ PTDGYQIQDG SGTRYVREGE QRNRGVEMNV FGEPVSGLRL
LAGLTLMDTE VSGTSGGSND GNRAIGVPTF QFNAGADWDV PGIAGAAINA RMLRTGGQYI
DAANTLSIPT WNRFDLGARY TFNVAQKDVT LRANVENLMN KDYWESAYGG YLTQGEPRTL
KLSGTLDF
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