| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3449 |
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| Symbol | |
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| ID | 1185114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3892045 |
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| End bp | 3893454 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394802 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | NP_793229 |
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| Protein GI | 28870610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCT CCGTCCGCGG CATCCTGCAT GCCCATCAGT CAGCGCTGTC GCTCGCCCAT
CGCCTGCTGG ACTTGACCGT CATTGTTCTG ATCGGACATT GGCAGTCCGG GCTGACGGCC
ATCGACAGCA CCGAAGCCTG GTTTCACATC ATCCTTGCGG TGCTGGTGTT TCACTGGGTC
AGCGAGTATC ACCAGTTGTA TGGCTCATGG CGTGGCGAGC GCATTTTGCG CGAGCTGACC
AAAGTCTTCA GTTACTGGGC CATGACCTTC GTCACGCTGC AATCGCTGAA CTACCTGCTG
ATCAACCGGA TGCAACTGCC CGATAACGGA CAGTTGCGCT GGTTCGTGCT GGTTCTTGCG
GTGCTGTGCG GCTATCGGCT GCTGATCCGT CTGACGCTGC ATAAACTGCG TCGGCACGGC
TTCAATACCC GGCGGGTCGC GATTGTCGGC ACCGGCCAGG TGGGTGAGCG TCTGGCCCGG
TCCATTTCCC TGGCGCCGTG GATGGGGCTG AACCTGCTGG GTTTTTACGA TTCGCATCCA
CAACAGATGA ACCTGCAGGG CGAGAAACGT CGCCTGCCGG TGCTGGGTGA TCTGGACCAA
CTGATCGAGG ACGCCCGGGA AGGCCGGATC GACAAGGTGT ACATCACCCT CGCCTTCAGC
GCCGATGCGC AATTGAGCGA GCTGATTACC GGCCTGAGCG ACACCACCGC ATCGGTTTAC
CTGATCCCGG ACGTGTTCAT GTTCGACCTG CTACATGCCC GCAGCGAGAG CATCAATGGC
CTGGCCAGCA TCAGCATCTT CGACTCGCCC ATGGACGGCG CATGGAGCCT GGCCAAACGC
GCCGAAGACA TTCTGCTGTC CAGTCTGATC CTGCTGCTCA TCGCCGTGCC ACTGCTGCTG
ATCGCCACCG CCATCAAACT GACGTCGCCG GGCCCGGTGC TGTTTCGTCA GCGTCGTTAC
GGACTGGACG GCCGCTCGAT CATGGTCTGG AAGTTTCGCA GCATGATCGT GCAGGACACG
GCCGAAGGCG TGCGCCAGGC AACGCGCAAC GACATTCGCG TGACGCCGCT GGGGGCTTTC
TTGCGGCGCA CCTCGCTGGA TGAACTGCCG CAGTTCTTCA ACGTGCTGCA TGGCGAGATG
TCCATCGTCG GCCCGCGCCC GCACGCCGTT GCGCACAACG AACAGTACCG CAAGCAGGTG
AGCGGCTACA TGTTGCGCCA CAAGGTCAAA CCCGGCATCA CCGGCTGGGC ACAAATCAAT
GGCTGGCGTG GCGAAACCGA CACGCTGGAC AAGATGCGCA TGCGCGTCGA ATTCGATCTG
GAATACATCG AGCACTGGTC GATCTGGCTG GACCTGAAAA TCATTCTGCT GACGCTGCTC
AAGGGTTTCG TCAACAAAAA CGCTTTCTGA
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| Protein sequence | MRTSVRGILH AHQSALSLAH RLLDLTVIVL IGHWQSGLTA IDSTEAWFHI ILAVLVFHWV
SEYHQLYGSW RGERILRELT KVFSYWAMTF VTLQSLNYLL INRMQLPDNG QLRWFVLVLA
VLCGYRLLIR LTLHKLRRHG FNTRRVAIVG TGQVGERLAR SISLAPWMGL NLLGFYDSHP
QQMNLQGEKR RLPVLGDLDQ LIEDAREGRI DKVYITLAFS ADAQLSELIT GLSDTTASVY
LIPDVFMFDL LHARSESING LASISIFDSP MDGAWSLAKR AEDILLSSLI LLLIAVPLLL
IATAIKLTSP GPVLFRQRRY GLDGRSIMVW KFRSMIVQDT AEGVRQATRN DIRVTPLGAF
LRRTSLDELP QFFNVLHGEM SIVGPRPHAV AHNEQYRKQV SGYMLRHKVK PGITGWAQIN
GWRGETDTLD KMRMRVEFDL EYIEHWSIWL DLKIILLTLL KGFVNKNAF
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