Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3435 |
Symbol | |
ID | 1185100 |
Type | |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3875338 |
End bp | 3876225 |
Gene Length | 888 bp |
Protein Length | |
Translation table | |
GC content | 61% |
IMG OID | |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00157752 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATA AACCCCACAC GCTTGCGTCT GCCCTGTTCC CGCTGGGCCT GCTGATCATC GCCATGATCA GCATCCAGAG CGGTGCATCA TTGGCGAAGA GCCTGTTCCC TGTCGTAGGC GCGCAAGGCA CCACCACTCT AAGGCTGGTG TTCGCAAGTC TCATTCTGCT GGTCATACTC CGCCCGTGGC GCGCGAGGCT GACTGCCAGG TCGCTGCGCA CGGTGGTGAT CTACGGCATT GCGCTGGGCA GTATGAACTT CCTCTTTTAT ATGTCCCTGC AGACTGTACC GCTGGGAATT GCCGTGGCAC TGGAGTTCAC CGGCCCATTG GCTGTCGCGC TGCTCTCTTC ACGCAAGCCG ATCGATTTTC TCTGGGTCAC GATGGCTGTC ATCGGCCTGT TGCTGTTGAT ACCCCTGAGG CACTCGGACG CCGCCATTGA CCTGGCCGGT GCGGGCTAAG CCCTGGGCGC AGGTGTGTGC TGGGCTGCTT ACATAGTGTT CGGGCAAAAG GCAGGTGCCG ACAACGGCGT GCAGACCGCC GCACTGGGCG TGATGATTGC CGCAATCTTC ATCGCCCCCA TCGGGGTCGT GCACGCCGGC GCTGCGCTGC TGGACATTTC ATTGATACCG GCAGCAATCG GCGTGGCCAT CCTGTCTACC GCCCTGCCCT ACAGCCTGGA AATGGTCGCC CTGACCCGCA TGTCAGCGCG CACGTTCGGC ACACTGGCAA GCCTGGAACC GGTCTTCGCC GCACTCTCAG GACTGGTGTT TCTTCACGAA AACCTATCAC TGACCCAGTG GCTGGCCATC GGCGCAATCA TCTTCGCCTC GATTGGCGCA ACCCTCAGCT CTGCCAACGC CAAACCACAA TTGGTGCCCG CAGACTGA
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Protein sequence | |
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