Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3362 |
Symbol | |
ID | 1185021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3800415 |
End bp | 3800846 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394713 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_793145 |
Protein GI | 28870526 |
COG category | [R] General function prediction only |
COG ID | [COG2153] Predicted acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000707749 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG TCACTGTAGC TGTCGCCCAA TGGCAGAAGA ACAACGCCGA TATCCGGCGC ATACGCGATT CGGTATTTAT TGCCGAGCAG TCCGTGCCAC CCGAACTGGA ATGGGATGCC GAGGACGCCG GGGCTGTGCA CTTTCTCGCA TATGAAGGGG AATACGCAGT AGGCACCGCC CGCCTGCTGC CCGATGGTGA AATTGGTCGC CTGTCTGTGC TCAAGGACTG GCGTGGCCTG AAGGTCGGCG AGGCATTGCT CAGCGCGGTG ATTCACGAAG CCGAGCAACG CGGGCTCAAG CCGTTGAAGC TCAGCGCTCA GGTGCAGGCT GTCGAGTTTT ACCAGCGCTT CGGCTTTACC GTGGTCAGTG ACGAGTTTCT CGAAGCCGGT TTACCGCACG TCGAGATGCG CCGCGAAACA CCTGAAAACT GA
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Protein sequence | MNKVTVAVAQ WQKNNADIRR IRDSVFIAEQ SVPPELEWDA EDAGAVHFLA YEGEYAVGTA RLLPDGEIGR LSVLKDWRGL KVGEALLSAV IHEAEQRGLK PLKLSAQVQA VEFYQRFGFT VVSDEFLEAG LPHVEMRRET PEN
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