Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3343 |
Symbol | |
ID | 1185002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3778356 |
End bp | 3779354 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394694 |
Product | glutathione S-transferase domain protein |
Protein accession | NP_793126 |
Protein GI | 28870507 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0435] Predicted glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.239612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCCTTT TGGTCGATGG GCGCTGGCAA GACCAGTGGT ACGAAAGCAG CAAAGATGGC GCGTTTCAGC GCGAAAATGC TCAGCGACGC AACTGGGTCA CGCGTGACGG CCAAGCTGGG CCATCCGGTG AAGGTGGTTT TGCTGCCGAA GCGGGCCGTT ATCACCTCTA CGTGTCTCTG GCGTGCCCAT GGGCGCATCG CACGCTGATC CTGCGCAAAC TCAAGGGCCT GGAAAAGCTG ATCGATGTAT CAGTGGTCAG TTGGCTGATG CTGGAAAATG GCTGGACCTT TGATCAGCAG AAAGGCTCAA GCGGCGACGC GCTGGATGAC TTTCAGTTCT TTCACCAGCG CTATACGGCC GATGACCCTC GATACACCGG TCGCGTGACC GTTCCGGTGC TGTGGGACAA ACAACAGCAG CGCATCGTCA GCAATGAGTC TGCGGAAATC ATCCGCATGT TCAATGCTGC GTTCGACGAA CTGACCGGCA ATACCCTTGA TTTCTACCCG TCCGCGTTGC AGTCGAGCAT TGACGAACTC AATGAGCAAA TTTACCCGAA GGTCAACAAT GGGGTCTATC GAGCCGGGTT CGCAACGTCG CAGGGTGCGT ACGAGGAAGC CTTCGATGAC GTGTTCGCTG AACTGGATGT GCTGGAAAAC CTGCTGGGCG AAAAGCGCTA TCTGACGGGA AAACACCTCA CCGAAGCCGA CATACGTCTG TTCACAACCA TCGTGCGCTT CGATGCGGTC TATTACAGCC ACTTCAAGTG CAACCTGCGG CGCATCGCGG ACTACCCCAA CCTCAGCAAC TGGCTGCGCG AGCTTTACCA ATGGCCAGGC ATTGCAGAAA CGGTAGACTT TGAGCACATC AAAGGCCACT ACTACGCTAG CCATCGCACC ATCAACCCGA CCGGAATCAT TCCCAAGGGG CCGGCACTTG ATCTGCAAGC AGGTCACGAC CGCGAGCGAT TGTCAGGTGA AGGTGCCTGG AGCAAGTAA
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Protein sequence | MGLLVDGRWQ DQWYESSKDG AFQRENAQRR NWVTRDGQAG PSGEGGFAAE AGRYHLYVSL ACPWAHRTLI LRKLKGLEKL IDVSVVSWLM LENGWTFDQQ KGSSGDALDD FQFFHQRYTA DDPRYTGRVT VPVLWDKQQQ RIVSNESAEI IRMFNAAFDE LTGNTLDFYP SALQSSIDEL NEQIYPKVNN GVYRAGFATS QGAYEEAFDD VFAELDVLEN LLGEKRYLTG KHLTEADIRL FTTIVRFDAV YYSHFKCNLR RIADYPNLSN WLRELYQWPG IAETVDFEHI KGHYYASHRT INPTGIIPKG PALDLQAGHD RERLSGEGAW SK
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