| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3318 |
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| Symbol | |
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| ID | 1184976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3751384 |
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| End bp | 3754125 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394668 |
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| Product | beta-glucosidase |
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| Protein accession | NP_793101 |
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| Protein GI | 28870482 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00176622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC GAAAGATGAT AGGCGCGCAC TCGGCGCTGG CCTTGCTGGC ACTGGCCGTT
TCTCAGGTGC ACGCCGCTGA TCCGACTGTG CAGCAGGGAC GTGAAGACCG CGCTGAAAAA
GCCGCGCAAA AGACCCTGGC GAAAATGACC ATGGAAGAAA AGCTGGCCTA CATCGGCGGC
ACCGGCGGCT GGGATGTGAA GCCGCTGACC AACTACGGCG TTCCGCAGAT TCACGGCGCT
GACGGCGGCG TGGGCGTGCG TTACACCAGC GAAGGCAACG ATCAGGGCGT GGTCTATCCG
TCCGGCCCTA ACCTGGCAGC CACCTTCAAC CCGCGTCGCG CCATCGACCT GGGCCGTGCT
CTGGGTTATG ACACTGCGAC CGGCGGCTAC CAGTTCATCA CAGGTCCAGG TGTAAACCTG
TACCGCATGC CTTACGGCGG CCGTGCATTC GAATACCTTT CCGGTGAAGA TCCGTTCCTG
GGCGCCAGCC TGGCACCGGG TGTCATCAAC GGTATCCAGT CCCGTGGTGT GTGGGCCAAC
GCCAAGCACT ACGCGGCCAA CGACCAGGAA AGCAACCGTT TCAATCTTGA CCAGAAGATG
CCCGAGCGCG TACTGCGTGA AATGTCGCTG CCTGCGTTCG AGTCGTCGTC GAAAAACGGC
AATGTTGCGA TGATGATGTG CGCCTTCCAG AAAGTGAACG GTGATTTCGC CTGCGAAAGC
GAGCACCTGA TCGCCCAGAT CCTGAAGAAG GAATGGGGCT ACAAAGGCTT CGTGCAGAGC
GACTACAACG CTGTGGTGCA CGGCTTTGAA GCTGCCCGCG CCGGTACCGA TCTGGACATG
ATGGGCTACC AGATGAACAG CTCCGTGCTC AAGCCGCACC TGGACGCCGG TGACCTGAGC
GCTGCGACCA TCGATGACAA GGTGCGCCGC ATCCTCAAGC AGATCTACCT GTACAAGTTC
GACAGCAAGG CACCGCTGAC CACCCACAAC ATGAACAGCT CGACCAGCAA CAAGGTCGCT
CTGAATGCTG CGCGTGAAGG CATCGTGCTG CTGAAAAACC AGGGCGATCT GTTGCCACTG
GACAAGCAGA AGGTCAAGAA AATCGCCGTC GTCGGCACCC TGGCCAAATA TGCACCACCG
ACCGGTTTCG GTAGCGCCAA TGTCATGGCC AGCCATTACG TCAGCGAGTT GAGCGGCCTG
CAGCAAATGG CACCCAACGC CAAGGTCGAG TTCATCGATG GCCTGTCGCT GGACCCAAGC
ACCTCTGCCT GGAACACCAC TGACGCCGCT GGCAACAGTG TTCAGGGCAT GAAGGTCGAA
TACTTCAGCA ACACCAACTG GTCTGGCGAT GCAGCGGTCA CCCGTACCGA GCAGCACGTT
GACCTGGACT GGGCCAACGA CAAGAACCTG CCGTTCGAGA GCAACACCTC AACGTCCGAT
CCGTACACCA CCAAAGGCTC GACCGCTGGT GAGCTGAACG GTGACACGTC TTCGACCTCG
ATCCGCTACA CCGGCAAGAT CACCCCGACC CAGAGCGGCG AACAGGTGTT CAAGGTGCGT
GCCGACGGCG CTGTGCGCCT GTGGGTCAAC GGCAAGAAAA TCATCGACAA CGGTGACGGC
AAGCCATTGC CGGGCAACAG CATCCCGCCG ACCATTCCAG AGTTCGCCAA GATCAATCTG
GAAGCAGGCC AGTCCTACGA CGTGAAGCTT GAGTACTCGC GTCGCGCCGG GTACCTGTCG
ACCATGGGTG GTCTGGTCGG TGTGCAGTTG AGCTCCGCTT CGCTGAACGC GCCTCAGGAC
CTGTCCGGTT ATGACGCGGT TGTGGTTGCA GTGGGTAACA GCAACGAATA CGAAGGTGAA
GGTTTCGACC ACAGCTTCGA TCTGCCCGAG TTCCAGAACG AACTGATCCA GAACATCGCC
AAGGTCAACC CGAACACCGT GGTGACCATG TATGGCGGTA CCGGCCTGAA GATGAGCGAC
TGGATCGAAC AGGTTCCGGT AGCGCTGCAC GCCTTCTACC CGGGTCAGAA CGGTGGTCAG
GCCCTGGCCG AAATTCTGTT CGGCAAGATC AACCCGTCGG GCAAGCTGCC GATCAGTATC
GAACGCAACA TCGAAGACAA CCCGGCCTAC GCCTCCTTCC CGAAATTCGA CAACCAGAAC
ACGCTGGCTG AAATGGATTA CAAGGATGAC CTGATGCTGG GTTATCGCGG TTACGAGAAG
AAAGGCATCA AGCCGCTTTA CCCGTTCGGT TACGGCCTGT CGTACACCAC GTTCGGCTAC
AGCAACATCA AAGTCACGCC AGGCGTCGCG GTGGGCAATA CGCCGATCAA GGTGTCCTTC
GACCTGACCA ACACCGGCAA GGTCGGCGGT TCGGAAGTTG CACAGCTGTA CGTTGGCCAG
CAGAACCCGA AAGTCGAGCG TCCGATCAAG GAACTCAAAG GCTACAAGAA GGTGTTCCTC
AAGCCGGGTG AAAGCAAGCG CGTGACCATC GAGCTCAATG ACCGCTCGCT GGCCTACTTC
GACGTGAAAA CCAACCAGTG GGTGGTTGAC GCCGACACCT TCAACCTGTC GCTGGGTGGC
TCGTCGCAGG ACATTCGCCT GAACGCCAAG CTGGTCAACT CGTTCCGCCA GGAACTGTCG
ACCACTACCA GCAACCCGCT GCCACGTTCG GCGCTGAACT CGGTGCTGGT CGAGAAGCCA
CCGGTCAAGA CCGGTGGTGT GTTCCAGCAG ACTGTCGAGT AA
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| Protein sequence | MNKRKMIGAH SALALLALAV SQVHAADPTV QQGREDRAEK AAQKTLAKMT MEEKLAYIGG
TGGWDVKPLT NYGVPQIHGA DGGVGVRYTS EGNDQGVVYP SGPNLAATFN PRRAIDLGRA
LGYDTATGGY QFITGPGVNL YRMPYGGRAF EYLSGEDPFL GASLAPGVIN GIQSRGVWAN
AKHYAANDQE SNRFNLDQKM PERVLREMSL PAFESSSKNG NVAMMMCAFQ KVNGDFACES
EHLIAQILKK EWGYKGFVQS DYNAVVHGFE AARAGTDLDM MGYQMNSSVL KPHLDAGDLS
AATIDDKVRR ILKQIYLYKF DSKAPLTTHN MNSSTSNKVA LNAAREGIVL LKNQGDLLPL
DKQKVKKIAV VGTLAKYAPP TGFGSANVMA SHYVSELSGL QQMAPNAKVE FIDGLSLDPS
TSAWNTTDAA GNSVQGMKVE YFSNTNWSGD AAVTRTEQHV DLDWANDKNL PFESNTSTSD
PYTTKGSTAG ELNGDTSSTS IRYTGKITPT QSGEQVFKVR ADGAVRLWVN GKKIIDNGDG
KPLPGNSIPP TIPEFAKINL EAGQSYDVKL EYSRRAGYLS TMGGLVGVQL SSASLNAPQD
LSGYDAVVVA VGNSNEYEGE GFDHSFDLPE FQNELIQNIA KVNPNTVVTM YGGTGLKMSD
WIEQVPVALH AFYPGQNGGQ ALAEILFGKI NPSGKLPISI ERNIEDNPAY ASFPKFDNQN
TLAEMDYKDD LMLGYRGYEK KGIKPLYPFG YGLSYTTFGY SNIKVTPGVA VGNTPIKVSF
DLTNTGKVGG SEVAQLYVGQ QNPKVERPIK ELKGYKKVFL KPGESKRVTI ELNDRSLAYF
DVKTNQWVVD ADTFNLSLGG SSQDIRLNAK LVNSFRQELS TTTSNPLPRS ALNSVLVEKP
PVKTGGVFQQ TVE
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