| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3294 |
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| Symbol | |
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| ID | 1184952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3724173 |
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| End bp | 3726308 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394644 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_793077 |
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| Protein GI | 28870458 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGTA CTCTCGTTTC ACTTTGTGTC ATTCAAGCTA TCTCCCAGGC CGCCTGGGCT
GACCAGGTTA CTGCCGGGCA ACCTTCGAGC GATTCGATAG AGTTGCAGAA CATCGACATT
CAAGGCGCCG CCAGTGCCGA AAACGCACAA GGGCCGGTTG ACGGCTATCG GGCCACACGC
TCCGCCAGCG CCACACGTAC CGACACCTCT TTGCATGAAA CCCCGCAGTC CGTCAGCGTC
GTGACCCGCG AGGCAGTGGA AGACATCGGT GCTACGCGCC TGCAGGATGC TCTCGATTAC
GCAGGCGGGG TCGGGCGGGC CAACAACTTC GGCGGCCAGG GCCTGACCAC GTTTACCGTG
CGCGGCTTCA CCACGGGAGA GTTCTATCGC AACGGCTTCC CGATCAATCG CGGTTATCCG
AACATGCCGG ACGCCAACAC CATTGAGCGC CTTGAAGTGC TGCGCGGTCC TGCCACCACG
CTGTACGGCC GTGGCGATCC GGGAGGCACT TTTAATGTGG TCTCCAAACA ACCGCTGGCC
GAGCGCAAGG TCACATTGGG CAGCCAGCTT AATGATCAGG GCATGAAGCG CGGTACGCTG
GATGCGTCCG GCCCGCTCGA TGATGAAGGG CGTTTTGCCT ATCGACTCAA TGTCGTGGGC
GAGGGTGGCG ATACCTTTCG TGATCACGTC GAAACCGAGC GTTATGGCGT GGCGCCGGTC
TTGAGCTGGC AGGTCAACGA CGCCACGCGC ATCACCTTCG AGGGTGATTT CATGCGCAAC
AACGCACCGC TGGATCGGGG CCTGACGCGC TATCCCGCCC AGACACGCAC CGCTTCGCGC
GACACCTTCT TCGGCGAAAA GAGCGTGGGC AAGCTGCACA ATGACAACAA CATGGCGCAA
CTGCGCTTTG ATCACGACCT GAACGCTGAC TGGAAGCTGG GCGGTGGCGT GCAGATGCTC
GACGGCTCGC TGCAAGGCGA TGCCATTGAG GCCAACGGCC TGGCCGCCGA CGGTAGCACC
CTGGGCCGTA ACTTCAACTA CCGCAAGCTG GAGTGGACTG ACCGCGATGT GCAACTGAAC
CTGACCGGGC ATTTCTCGGC GGGCGGTTTC GAGCACACGC TGCTGACCGG CGTGGAGTAC
GAAGACTACG ACTACAAATC GATCATCCAG CGCTCCAGCG GCGCAGTCAG TGCCTACCCC
ATCGACATCT TCAATCCGGT CTATGGCCAG GCTCGACCCG CACTGACCCG AACCACCACC
CACGACAAGG AAAATCTGAA AACCTGGGCT GCCTTCGTCC AAGACCAGGT AACGCTGACC
GAGCGCCTGA AACTGGTGGG CGGCGTGCGT CTGGAGCGCT TCGAGCACGA CTACGATTCT
TTCCTCCCCG GCACCAGCAG CTGGACCGCC AGCGATAACG CCGTCACACC GCGTGTTGGT
CTGAGCTGCG ACCTGACCGA CACCGTCGCG GTCTACGCCA ACACCGCGCG TTCATTCAAA
CCCAACAGCG GTGCCAGCCG GCTGGGTGGC GGCTTCAAAC CGGAAGAGGG CAAGTCATAC
GAGATTGGTA CCAAGTGGGA AACGCTGGAA GGGCAGTTGA GTGTCGACGC GGCGATCTAC
CAGATCGAGA AACGCAACGT GCTGACCACC GACCCGGTTG ACTCCACATT CAGCGTGGCG
GCAGGCGAAG TACGGAGCCG TGGCCTGGAC CTCAACGTGG TCGGCAACCT GACGCCCGAG
TGGCGGATGA TGGGCAGCTA CGCGTACGTC GACGCCGAGG TGACCAAAGA CAACACGCTG
CGCTCCGGCA CACGTCTGAT GAACATCCCC GAACAGACGT TCAGCCTGCT CAATGTCTAC
GAATTTCAGG ACGGTGCGTT GCGTGGCCTG GGGTTGGGCG CCGGCGGCCG CTACGTCGAT
CAGCGCGCCG GCCGTACCGC CAACGTCGCC TTCTCGATGG ACAGCTACAC CGTGTTCGAC
CTGCTGGCCT TTTACAAGGT CAACCCGAAC GTCAAGCTCA ACCTCGACCT GAAGAATGTT
TTTAACACCG AGTATGAAGA AGGCGCGTTT GGCAACGTCT ACGCGTATCC GGGGGCTCCG
CGGACGGTGC AGGTGGGGAT CGCCTATACG CTGTGA
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| Protein sequence | MRRTLVSLCV IQAISQAAWA DQVTAGQPSS DSIELQNIDI QGAASAENAQ GPVDGYRATR
SASATRTDTS LHETPQSVSV VTREAVEDIG ATRLQDALDY AGGVGRANNF GGQGLTTFTV
RGFTTGEFYR NGFPINRGYP NMPDANTIER LEVLRGPATT LYGRGDPGGT FNVVSKQPLA
ERKVTLGSQL NDQGMKRGTL DASGPLDDEG RFAYRLNVVG EGGDTFRDHV ETERYGVAPV
LSWQVNDATR ITFEGDFMRN NAPLDRGLTR YPAQTRTASR DTFFGEKSVG KLHNDNNMAQ
LRFDHDLNAD WKLGGGVQML DGSLQGDAIE ANGLAADGST LGRNFNYRKL EWTDRDVQLN
LTGHFSAGGF EHTLLTGVEY EDYDYKSIIQ RSSGAVSAYP IDIFNPVYGQ ARPALTRTTT
HDKENLKTWA AFVQDQVTLT ERLKLVGGVR LERFEHDYDS FLPGTSSWTA SDNAVTPRVG
LSCDLTDTVA VYANTARSFK PNSGASRLGG GFKPEEGKSY EIGTKWETLE GQLSVDAAIY
QIEKRNVLTT DPVDSTFSVA AGEVRSRGLD LNVVGNLTPE WRMMGSYAYV DAEVTKDNTL
RSGTRLMNIP EQTFSLLNVY EFQDGALRGL GLGAGGRYVD QRAGRTANVA FSMDSYTVFD
LLAFYKVNPN VKLNLDLKNV FNTEYEEGAF GNVYAYPGAP RTVQVGIAYT L
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