Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3181 |
Symbol | |
ID | 1184838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3572634 |
End bp | 3573083 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394536 |
Product | transcriptional regulator, putative |
Protein accession | NP_792970 |
Protein GI | 28870351 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.387057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGGA TAGGTCCACG ACTCAAGAAA GAACGCTTGC GGCTAAAGAT TTCTCAGAGT GCACTCGGGG CCATAGGCGG TGTGGAAACC AACGCCCAGG GCAACTACGA GAACGGTGTG CGCTCCCCAC GCGCAGACTA CCTGTCGCGC ATTGCGGATG CGGGCGTCAA CGTTACCTAC GTCGTTACCG GTTTCAGTGA CGCTGCACCT ACCCCCACCG CGCAGGCCAC GACCACTCGG GAAAGTGACC CGCTAAAGCG CGTGGTTGCG CGCCTGCACA GCAATCTGCA CAACGTGACG CAGAACATCT ACCACGTTAC CCGACTGATG GAATCAGATG CTGACGACGG AAATCTGGAC AAAGGGCAGA TGGAAAACAT CAAAAATGAC GCAGAAGCCA TCACCGTCGC GACCGTTCGC CTGATTTACA TGACCTCTAA ACTGAAGTGA
|
Protein sequence | MTGIGPRLKK ERLRLKISQS ALGAIGGVET NAQGNYENGV RSPRADYLSR IADAGVNVTY VVTGFSDAAP TPTAQATTTR ESDPLKRVVA RLHSNLHNVT QNIYHVTRLM ESDADDGNLD KGQMENIKND AEAITVATVR LIYMTSKLK
|
| |