Gene PSPTO_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3181 
Symbol 
ID1184838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3572634 
End bp3573083 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID637394536 
Producttranscriptional regulator, putative 
Protein accessionNP_792970 
Protein GI28870351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.387057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGGA TAGGTCCACG ACTCAAGAAA GAACGCTTGC GGCTAAAGAT TTCTCAGAGT 
GCACTCGGGG CCATAGGCGG TGTGGAAACC AACGCCCAGG GCAACTACGA GAACGGTGTG
CGCTCCCCAC GCGCAGACTA CCTGTCGCGC ATTGCGGATG CGGGCGTCAA CGTTACCTAC
GTCGTTACCG GTTTCAGTGA CGCTGCACCT ACCCCCACCG CGCAGGCCAC GACCACTCGG
GAAAGTGACC CGCTAAAGCG CGTGGTTGCG CGCCTGCACA GCAATCTGCA CAACGTGACG
CAGAACATCT ACCACGTTAC CCGACTGATG GAATCAGATG CTGACGACGG AAATCTGGAC
AAAGGGCAGA TGGAAAACAT CAAAAATGAC GCAGAAGCCA TCACCGTCGC GACCGTTCGC
CTGATTTACA TGACCTCTAA ACTGAAGTGA
 
Protein sequence
MTGIGPRLKK ERLRLKISQS ALGAIGGVET NAQGNYENGV RSPRADYLSR IADAGVNVTY 
VVTGFSDAAP TPTAQATTTR ESDPLKRVVA RLHSNLHNVT QNIYHVTRLM ESDADDGNLD
KGQMENIKND AEAITVATVR LIYMTSKLK