Gene PSPTO_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3157 
Symbol 
ID1184814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3549774 
End bp3550406 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID637394514 
Producthypothetical protein 
Protein accessionNP_792948 
Protein GI28870329 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000422864 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAATGA TTCTCGTATT TAATAGTCTA TTCTCATCAC GGATGACCTC TGTCAGCTCA 
AGGAAGAATC CCCCATGGAA GATCAGCGAG CGATACGCCA TGAGTAATCA GCTCTCGTCC 
TTACTGCACC TGCCCGCCCG ACTGCCTGAT GCGCAGCCGA CGCCTGAGTC GATCGAACTT 
GGCCAGCAAC TGGGCAAACT GTCGCGCCGG ACCCGGCAGA TATTCCTGCT GAGCCGACTC 
GACGGCCTGC CGTACGCCGA TATCGCGCGC TTCATGGACG TAGACGTCAC TCGGGTAGAA 
CGCGCCATGC TCAGGGCATT GGGCAAAACC CATCGCCAAA CCACCGACGA CGCCCGTGCC 
ATTCAGGATC AGGCCAACCG CTGGTACGTG CACCTGCAAA GCCCCACTGC CACGGCCAGC 
GAGCGGATCG AGTTTCGTCA CTGGCTCGAT GCCGATGCAG CACACCTCTC GGCGTTTCAG 
AACAGCGAGC GCGTCTGGCG TCTTTTGCAG GCACCTGCCG CACTGCTTGG CGCCAGCGGC 
TGGCATCGGC GCAAGCGCAG GGTTTATCTG GCCTGGTGCC TGCTCACGGC ATTCATCTGC 
AGCCTGATGG TCACGGCCGA AGCGATCTCC TGA
 
Protein sequence
MRMILVFNSL FSSRMTSVSS RKNPPWKISE RYAMSNQLSS LLHLPARLPD AQPTPESIEL 
GQQLGKLSRR TRQIFLLSRL DGLPYADIAR FMDVDVTRVE RAMLRALGKT HRQTTDDARA 
IQDQANRWYV HLQSPTATAS ERIEFRHWLD ADAAHLSAFQ NSERVWRLLQ APAALLGASG 
WHRRKRRVYL AWCLLTAFIC SLMVTAEAIS