Gene PSPTO_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3136 
Symbol 
ID1184793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp3525969 
End bp3526577 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID637394494 
Productacyl carrier protein phosphodiesterase 
Protein accessionNP_792928 
Protein GI28870309 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00683712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTC TGCACCTTGA TTCCAGCATC CTCGGCGATC ATTCCGCTTC GCGTCAGCTG 
TCCCGTGATG TTGTCGAGGC TTATAAAAGC ACCCACGCCG ATAGCCACGT GACCTATCGC 
GATCTGGCCA GCGAAGCCCT GGGGCATTTC TCTGCGGCCA GCCTTGCCGC AGCGGGCACT 
CCGGTAGAAG CACGTGATGC CGCTCAGCAG CAGGAAGTCG ACAATAACGA AGCCACGTTG 
CAGCAGTTTC TCGACGCCGA CGTGCTGGTG ATCGGTGCGC CGATGTACAA CTTCAGCATT 
CCGTCGCAGT TGAAAGCGTG GATTGATCGC ATTGCTGTTG CGGGTCGCAC TTTCCGTTAT 
TCCGAAGCCG GGCCTGAAGG CCTGTGCGGC GGCAAGAAAG TCATTATCGT TTCCACTTCC 
GGTGGCCTGC ATCAAGGGTT GCCAACCGGT GCAGGCCACG AAGAGCTGCT CAAGGCACTG 
TTTGCCTTCA TCGGTATCAC CGACCTGCAG TTCGTTCGCG CACACGGCCT GGCGTATGGC 
GAAGAGCCTC GCGCCAACGC CATGGCCGCC GCGAAGCAGC AGATCGAGAG CGAGCTGTTG 
GCCGCCTGA
 
Protein sequence
MNILHLDSSI LGDHSASRQL SRDVVEAYKS THADSHVTYR DLASEALGHF SAASLAAAGT 
PVEARDAAQQ QEVDNNEATL QQFLDADVLV IGAPMYNFSI PSQLKAWIDR IAVAGRTFRY 
SEAGPEGLCG GKKVIIVSTS GGLHQGLPTG AGHEELLKAL FAFIGITDLQ FVRAHGLAYG 
EEPRANAMAA AKQQIESELL AA