| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3119 |
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| Symbol | |
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| ID | 1184776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3503526 |
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| End bp | 3505343 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394477 |
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| Product | glycosyl hydrolase, family 15 |
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| Protein accession | NP_792911 |
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| Protein GI | 28870292 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0769806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAC TGATCGAAGA CTACGCATTG CTGGGCAACT GTCAGACAGC TGCCCTGGTC
GCCCGGGATG GCTCACTGGA CTGGTTGTGT TTTCCGCGCT TTGACTCGAC GGCCTGTTTT
GCGGCATTGC TGGGCAGCGA AGAACACGGG CGCTGGAAGA TCGCGCCACG CGCCGAGGTT
ATCGCGGTTG AGCGCCGTTA TCGTGAAGGG ACGCTGATTC TCGAGACCGT CTTCGAAACC
CGTGACGGTC GCGCGATGTT GATCGATTTC ATGCCCATGA ACACCAGCGG CCATGTAGTG
CGTATGGTGG TCGGGCTGAG CGGGCAGGTG GAGTTCGGCG TAGACCTTGC AATTCGCTTC
GATTACGGCA GCAGCGTGCC GTGGGTCGAG CGCAAGGACG CGCATACGTT GACAGCGGTG
GCCGGTCCCG AAATGCTGGT TTTGCACAGC CCGGTGGCCT TGCATCCGCA GGATCACCAT
ACCGCCAGTC AATTTCAGGT CGGGGAAGGT GAGCGCAAGG TGTTCGTTCT GGCGTACCAG
CCTTCCTTCG AACCTTTGCG CGTACAGATC GATCCCGATC ATGCGCTCGA GACCACTGCA
GCCTACTGGC GCGAGTTTTC TGATCGGTGC CCTGATGTCG GGCCGTGGAC GGGGCAGGTG
AAACGCTCGC TGATCACCCT CAAGGCCATG ACTTATGCGC CCACCGGCGG CATTGTTGCC
GCCGTGACGA CCTCGTTGCC TGAGCAATTG GGCGGCGAGC GTAACTGGGA CTACCGCTAT
TGCTGGTTGC GCGACGCGAC GATGACCCTG CTGGCTTTCA TGAATCTGGG TTATTTCGAG
GAAGCCACCG CCTGGCGCGA TTGGCTATTG CGGTCGATTG CCGGCAACCC GGAACAGATA
CAGATCATGT ACGGCGTGGG CGGTGAGCGG CGTTTGCAGG AATATGAACT GCCGTGGTTG
AGCGGCTACG AGCACTCGCT GCCAGTGCGA GTGGGTAACG GCGCGGCCAA TCAGGTTCAG
CTGGATGTCT ACGGCGAAGT CGCAGATGCG ATGATTCAGG CCCTTAAAGG CGGCATGCCG
CAGCACCCGC GCAGCGTGGC TATTTCCAAG GTGGTGATGC CTTATCTGGC GAAGATCTGG
CACCTGCCGG ACGCCGGAAT CTGGGAGATT CGCTCCGAAC CACGTCACTT CACCCATTCC
AAAGTCATGG CCTGGGTGGC CTTCGACCGC AACGCCACGC AGATCGCTCA GGCTGCCGAA
GGCGAAGAAG ATCGTGCTCT GGCGGAACAC TACCGGCGAG TGGCGGACGA AATCCATGCG
GATGTCTGTC GCCACGGCTT TGATGCCGAA CTGGGCAGTT TCGTGCAGAC CTACGGTTCG
ACAGAGGTCG ATGCCAGTTT GCTGCAGATT GTCCTGACCG GTTTTTTGCC ACCCGAAGAC
CCTCGTGTCA TCGGCACTGT CGCGCAGATC GAGCGCACGC TGATGCAGGA TGGCCTGTTA
CTGCGCTACG ACAATGAGCG CAGCGTCGAT GGGGTGGCAG GACGCGAAGG GACCTTTCTG
GTCTGTTCGT TCTGGCTGGC CGATGCCTAC GTGCTGCTGG GCCGGGCCGA TGACGCCGCA
GCGCTGTTCG AGCGGTTGTG CGGTTTGTGC AATGACGTCG GGCTACTCGC GGAGCAATAT
GATCCGAAGG ATGGTCGGAT GCTGGGCAAT TTCCCGCAGG CGTTCAGTCA CATTGGCATT
ATCAATACCG CGCTGAACCT GCATCGAGCG GTCTGTCCTG CGTTGACACG GACTTCAGGG
GCGCTTGAGG GGGCTTAG
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| Protein sequence | MAALIEDYAL LGNCQTAALV ARDGSLDWLC FPRFDSTACF AALLGSEEHG RWKIAPRAEV
IAVERRYREG TLILETVFET RDGRAMLIDF MPMNTSGHVV RMVVGLSGQV EFGVDLAIRF
DYGSSVPWVE RKDAHTLTAV AGPEMLVLHS PVALHPQDHH TASQFQVGEG ERKVFVLAYQ
PSFEPLRVQI DPDHALETTA AYWREFSDRC PDVGPWTGQV KRSLITLKAM TYAPTGGIVA
AVTTSLPEQL GGERNWDYRY CWLRDATMTL LAFMNLGYFE EATAWRDWLL RSIAGNPEQI
QIMYGVGGER RLQEYELPWL SGYEHSLPVR VGNGAANQVQ LDVYGEVADA MIQALKGGMP
QHPRSVAISK VVMPYLAKIW HLPDAGIWEI RSEPRHFTHS KVMAWVAFDR NATQIAQAAE
GEEDRALAEH YRRVADEIHA DVCRHGFDAE LGSFVQTYGS TEVDASLLQI VLTGFLPPED
PRVIGTVAQI ERTLMQDGLL LRYDNERSVD GVAGREGTFL VCSFWLADAY VLLGRADDAA
ALFERLCGLC NDVGLLAEQY DPKDGRMLGN FPQAFSHIGI INTALNLHRA VCPALTRTSG
ALEGA
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