| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3110 |
|---|
| Symbol | |
|---|
| ID | 1184767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3496381 |
|---|
| End bp | 3497391 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394468 |
|---|
| Product | cointegrate resolution protein T |
|---|
| Protein accession | NP_792902 |
|---|
| Protein GI | 28870283 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00291993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGGG GCGGCGTAAA CAAGGCATTG GTGCTCAAGG CAAGGGCTTC TCTGTTAGCC
AGAGGCGAGA ATCCGAGCAT TGATGCGGTA CGCATCGAGA TGGGTAATAC CGGCTCGAAA
ACCACGATTC ATCGCTACCT CAAAGAACTG GATGCTACGC ACGCGCCAGC GCCGGACCTC
AATGAGGAAC TGAGCGATCT GGTGGCCCAC CTCGCCCAAC GCCTTGACGA GCAGGCGCAG
GAGCGCATAG ACGAGGCGCA CGACAAGTAC CAGGCCAGCT GCAATGACCT GCAGCAGCAA
CTGACGACGG CCCGGCAACA GATCAGTGAA TTGCAGGAAC ACCTGCTGCA ACGCAACGAG
ACCGTCGAAC ATCAGGCCAC CGCCCTGCTC CAGACCCGGC AAACGCTGCA AGACGCCCAG
ACCGAGCACG CCAGGCTGCT GCAAGCCAAT CTTGATCTGG AATCTCGCCT GCAAGACAAG
GAGGGTCAGA TTCACTCCCT TGAGGAAAAA CACCAGCATG CCCGCGAAGC ACTGGAGCAC
TACCGCAACT CGATCAGGGA GCAGCGCGAG CAGGAGCAGC AGCGCCATGA AGGCCAGGTT
CAGCAATTGC AGATGGAATT GCGACAGGCA CAGCAAAGCC TCGCCATGCG CCAAGAAGAG
ATCACGCAGC TCAATCGCGA CAACGAACGG TTGCTGGCTG AAAACCGCAG CACTCTGCGT
GTCGCGCACG ACCAGAAAGA TCAGCTGAGC CGGGCCACTG CCCAGGCCGC TGCGTTGGCT
GAACACCAGC AACGCACCCA TACACAGTGC GCACTGCTGG AAGAAAGGCT ACGCAGCCTG
CAGGAAGAGC GTGCGGCGCT CAAACAGAGC GTGACCGATG GCCAACAGCA AAACCGGATG
CTGGAACTGC TGTTGATCAA AAAGGAAGTC GCATTGGAAA ACCTGCAACT ACAGGCCAAC
CCGCCTGAAA AACCTGCGAC GGGCAAAAAG AAGCCACCCA ATAAAGCGTA A
|
|---|
| Protein sequence | MARGGVNKAL VLKARASLLA RGENPSIDAV RIEMGNTGSK TTIHRYLKEL DATHAPAPDL
NEELSDLVAH LAQRLDEQAQ ERIDEAHDKY QASCNDLQQQ LTTARQQISE LQEHLLQRNE
TVEHQATALL QTRQTLQDAQ TEHARLLQAN LDLESRLQDK EGQIHSLEEK HQHAREALEH
YRNSIREQRE QEQQRHEGQV QQLQMELRQA QQSLAMRQEE ITQLNRDNER LLAENRSTLR
VAHDQKDQLS RATAQAAALA EHQQRTHTQC ALLEERLRSL QEERAALKQS VTDGQQQNRM
LELLLIKKEV ALENLQLQAN PPEKPATGKK KPPNKA
|
|---|
| |