| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3084 |
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| Symbol | |
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| ID | 1184741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3465952 |
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| End bp | 3466611 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394444 |
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| Product | glutamine/glutamate ABC transporter, permease protein |
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| Protein accession | NP_792878 |
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| Protein GI | 28870259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAGTT CGGGTCTTGA ATTGTTGTGG GTGTCGGCGC CGCAATTGAT CACCGGGGCA
GGCCGAACGC TGGGAATTTC GCTGCTTGCG ATCGTCTTCA GCAGTGTGGG TGGCCTGTGT
TACGGCGTGT TGCGCAGCCT CGGCAAGCGT TGGCTCGAGA TACCGCTGCG CATTTATCTG
GAGCTGTTCC GGGCGATCCC CGTGCTGGTC TGGTTGTACC TGTTCTTCTT TGGCTTGCCG
ATCTTCTTTG GCCTGAGCAT TCCGGCGTTC TGGTGCGCGG TTCTGGTGTT GTCGCTGTGG
GGGGCCAGCG AGGTCGGCGA AGTGGTGCGC GGCGGGCTGC GTTCCATCCC GCGCGGGCAA
CGTGAAGCGG GCTTGGCGAT CGGCCTCGGT CTGGGCCAGC TGTATGGTCG AGTGCTTTTG
CCGCAAGCGC TCAAGCGCCT GACGCCGCCG GTGATCAATG TCTACACGCG CCTGATCAAG
ACCAGTTCGC TGGCAGTGTT GATCGGCGTC ATCGACATCA CCAAGGTCGG CCAGCAGATT
ATCGAGCGCA CTTATGAGTC GGTGCTGATC TACGGCTTTC TGTTTTTGTT CTTTTTTATC
GTCTGCTATC CGCTGTCAGC CGCCTCGCGC GTGCTTGAAG GGCGCTGGAA TCACGCATGA
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| Protein sequence | MASSGLELLW VSAPQLITGA GRTLGISLLA IVFSSVGGLC YGVLRSLGKR WLEIPLRIYL
ELFRAIPVLV WLYLFFFGLP IFFGLSIPAF WCAVLVLSLW GASEVGEVVR GGLRSIPRGQ
REAGLAIGLG LGQLYGRVLL PQALKRLTPP VINVYTRLIK TSSLAVLIGV IDITKVGQQI
IERTYESVLI YGFLFLFFFI VCYPLSAASR VLEGRWNHA
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