| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3049 |
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| Symbol | |
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| ID | 1184706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3429981 |
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| End bp | 3430907 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394409 |
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| Product | sugar ABC transporter, periplasmic sugar-binding, putative |
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| Protein accession | NP_792843 |
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| Protein GI | 28870224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00910782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGCT GCACATTGCT TTTTGCCTCT CTGCTACTTG TCTTAAGCCC ATGGGCCACC
GCCAGCTATC GCATCGGCGT GAGCATCGCA AGGGTCGACG ATAACTTCAT GACTTACGTG
CGCAGCGGCG TGGAGGACGC GGCAAAAAAA GAAAACGTAC AGGTCCAGTT CGAGGACGCG
CAAGGCGACG TGGTGCGCCA GCTCAATCAG GTTCAGGGAT TTATCAATCA AAAAGTCGAC
GCAATTATCG TCCTGCCCGT GGACACCGCC GCCACCGCCA ACCTGACCCG CGCTGCCGTT
GAGGCGAAGA CGCCGCTGGT CTACGTCAAC CGCCATCCGG ACGAGCGCGT CCTGCCTAAA
GGCGTGGTTA CCGTGGCGTC CAATGACATT GAGGCCGGGC AGCTGCAAAT GCGCTACCTG
GCGGAAAAAC TAGGGGGCAA AGGTACCCTC GCCATCATCA TGGGTGACCT TGCGCAAAAC
GCTACGCATG ACCGCACCGA AGGCGTCAAG CAGGTGCTCA AAGACTATCC CGGCATCAAG
ATAGTCGAAC AACAAAGCGC CGAATGGCAA CGCAACAAAG GCATGGACCT GACCAGCAAC
TGGCTGCTGG CAGGCACCAA GTTTGACGCC ATCGTCGCCA ACAACGACGA GATGGCTATC
GGTGCCGCCA TGGCCCTGCA GCAGGCTGGC AAAACCAAGG GCGAAATTGC AATTGTCGGC
ATTGATGGTC TGCCCGACGG CCTGGCCGCG ATTAAACGCG GAATGCTGGT CGCCTCAGTC
TTTCAGGACC CCAAAGCCCA AGCCACCGCC GCAGTACAGG CGTCCATTAA AATGATCAAA
GGTGAGCCAG TCGAAACGGA TGTCTGGGTG CCCTTTCAGT TGATTACGCC CGAACAAGTG
GCCGTGTTTG AGCAGCATTA TAAGTAG
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| Protein sequence | MRRCTLLFAS LLLVLSPWAT ASYRIGVSIA RVDDNFMTYV RSGVEDAAKK ENVQVQFEDA
QGDVVRQLNQ VQGFINQKVD AIIVLPVDTA ATANLTRAAV EAKTPLVYVN RHPDERVLPK
GVVTVASNDI EAGQLQMRYL AEKLGGKGTL AIIMGDLAQN ATHDRTEGVK QVLKDYPGIK
IVEQQSAEWQ RNKGMDLTSN WLLAGTKFDA IVANNDEMAI GAAMALQQAG KTKGEIAIVG
IDGLPDGLAA IKRGMLVASV FQDPKAQATA AVQASIKMIK GEPVETDVWV PFQLITPEQV
AVFEQHYK
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