| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3031 |
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| Symbol | |
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| ID | 1184688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3407122 |
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| End bp | 3408144 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394392 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_792826 |
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| Protein GI | 28870207 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00306924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACC TTTCTCCGTT GGCGCGTCGC CGCCTGGAAC GTTTTCGCAG CAATCGCAGG
GGTTGGTGGT CGTTGTGGCT GTTCTGCGGG CTGTTCGCCC TGACCTTGGG TGGCGAACTG
ATCGCCAATG ACAAACCGCT GATGGTCAGT TATCAGCACT CGCTCTACTT TCCGATGTTC
AAACGCTACA CCGAGCAGCA ATTTGGCGGC GAACTGCCCT TCCAGCCGGA TTATCGCAGC
GACTACGTGC GCCAACTGAT CACCAAGGGC GACGGCTGGA TGCTGTTTCC ACCGGTCCCG
TTCAGTGACG TTACGCCCAA CTACGAACTG ACGTCCCCGG CGCCCAGCCC GCCCTCGGCG
AGCAACTGGC TGGGCACCGA TGATCAGGCG CGCGATGTAC TGGCGCGGGT GATCTTCGGT
GCGCGCATCT CAATTCTGTT TGCGCTGGTG CTGACCTTCG TCAGCGCATT GATCGGCATC
AGTGCCGGCG CGCTGCAGGG CTATTACGGG GGCTGGGTGG ACCTGTTCGG CCAACGGCTG
CTTGAGGTCT GGTCAGGTTT GCCGGTGCTT TACCTGCTGA TCATTCTATC GGGCTTTGTA
GAACCTGATT TCTGGTGGTT GCTGGGCATC ATGGCGCTGT TTTCCTGGCT TACCCTGGTC
GATGTGGTGC GCGCCGAGTT CTTGCGCGGC CGTAACCTGG AGTACGTCAA GGCAGCCCGC
GCACTTGGTC TGGGAGACAG GAAAGTGATC ATGCGCCACA TCCTGCCCAA TGCCATGAAT
GCGACGCTGA GCTACCTGCC GTTCATTCTC ACCGGTGCCA TTTCCACTCT GACCGCGCTG
GATTTCCTGG GCTTTGGCAT GCCTGCCGGC AGCGCCTCGC TGGGCGAGCT GATCGCTCAG
GGCAAACAAA ACCTGCAAGC GCCCTGGCTG GGCCTGACGG CGTTCTTTGC CCTCGCGCTG
ATCCTCACGC TGCTGGTATT CATTGGCGAG GCGCTGCGCG ATGCCTTCGA CCCGAGGTCC
TGA
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| Protein sequence | MRNLSPLARR RLERFRSNRR GWWSLWLFCG LFALTLGGEL IANDKPLMVS YQHSLYFPMF
KRYTEQQFGG ELPFQPDYRS DYVRQLITKG DGWMLFPPVP FSDVTPNYEL TSPAPSPPSA
SNWLGTDDQA RDVLARVIFG ARISILFALV LTFVSALIGI SAGALQGYYG GWVDLFGQRL
LEVWSGLPVL YLLIILSGFV EPDFWWLLGI MALFSWLTLV DVVRAEFLRG RNLEYVKAAR
ALGLGDRKVI MRHILPNAMN ATLSYLPFIL TGAISTLTAL DFLGFGMPAG SASLGELIAQ
GKQNLQAPWL GLTAFFALAL ILTLLVFIGE ALRDAFDPRS
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