| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3011 |
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| Symbol | |
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| ID | 1184667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3385417 |
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| End bp | 3387882 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394373 |
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| Product | TonB-dependent sideophore receptor, putative |
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| Protein accession | NP_792808 |
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| Protein GI | 28870189 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01629] phage/plasmid replication protein, gene II/X family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.659574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAG TGGATATGAA GCAAGTCTTA CACCGTGCCC GAGCATCGTC TGCTGCGCCG
GGTTTCTGCC CGCTGGCGTT GGCGATAGGG GGCGTGTTGC TGTCAGGGAC GATTCAGGCT
CAGGAAAAAA CCTTCGAGGA CGAACGTCGT ACCTTGTCCA CCGTGGTGGT CACCGGTAAT
CGCGGCGCCG AGCAGCGCAC CGTGACCAGC AGCCCGGTGC CGATCGATGT GGTCAGCGCC
AAACAGTTAC AAAGCACCGG CAAGCCTGGC CTGATGGAAG CCTTGAGCGC AGTGATTCCA
TCGCTGACGC TGCCGGAAAA AACCGGTTGG GACGCCAGCG GCATTGCCCG GGCGCCCAAC
TTGCGTGGCC TGAGCGCCGC CGAGGTGCTG GTGCTGGTCA ATGGCAAACG CCGCCATACC
AGCGCGACGC TGAGCATCAA CGGCATCAAC ACCGGTGCTG CGCCGGCAGA CCTCGATCTG
ATTCCCATCA GCGCCATTGA TCATGTCGAA GTGTTACGCG ATGGCGCGGC GGCTCAATAC
GGCTCCGATG CCATTGCAGG GGTGATTAAC GTCATCCTCA AGGCCGACAC CAGCGGCACG
TCGGTGACCA ATGCCGGGCT CGGTTATGAC GGCAAGAAGC AGACCGTGCA GCAAAGCCTT
AACAAAGGCT TCGAGATTGG CGACGGCGGT ATCGTGCAAC TGGCGCTGGA TGCGCGCAGC
CAGAATGACG ACAACAAGGC CAGCGCCAAT GGCTACAGCT ACGAGCAAGC CTACGACCTG
GCAGGCAAGT CCACGTACGG CGGTTACGGC ACGCCGAAAA CCAATCTGCT CACACTGGGC
TACAACGCCG AGTTACCGAT TGACGACAGT TTCAGCCTGT ATTCCTTCAC CACCTATTCG
CGGCGCAAAG GCGAGCAAGG TCAGAACTTT CGCCTGCCGA CCATCACCAA CACCATTCCC
ACCGGGCCTA ACGGTTACCC AGCGGGATAC ACGCCGACCT GGTACATCGA TGAAGACGAT
TTTCAGGCCG CATTCGGTGG CAAAGGCACG CTCGGCGAGT GGGACTGGGA TTTGTCCACT
ACCTACGGGC GTAATGAAGC GGAGCAGGGC ACCACGCATA ACCAGAACCC GTCTCTGGGG
CAGGCCACGC CGAACAGCTT CACCTCCGGC ACATGGATTT CCACCGAGCT GACCACCAAT
CTGGACTTCA AGCGCGGCTT TGACGTCGGC CTGCAAAAGC CCCTCGACGT GTCCTACGGC
TTTGAACATC GGCGCGACAC CTATGAGGTG CAGGCGGGCG ATTACGAGTC CTATGCCAAC
GGCGGCTACT GCGTTGCACC CGGCAACTGT GCATCATCTG GAGCGCAGGT CACCAATGGC
ATTTCACCGG ACGAAGAAAG CAGCGCCTCA CGCAACAGTG TCGCCAGTTA TGTCGACGTG
GGCTTCAACC CTGTGCCCGA CTGGTATGTC GGCAGCGCAT TACGCTACGA GCATTACAAT
CAAGGGGTGG GCGCGACCCG CAGCGGCAAG CTGACCACGC GTTATGACTT CACCCCGCAG
TTCGCCGTAC GTGCCACTGT CAGCAATGGT TTTCGGGCGC CGTCTCTGGC CAACAGCCTG
TTCAGTGCGC GCTCGACTAC CTACGGTGTA GTGGACGGCG TGTATCAGTC GATCAACTAC
GGCGTATTAC CAACCGGTTC AGGGGCCGCC AGAGCGCTGG GTGCCGAGGA CCTCAAGCCG
GAACGCTCCA CCAACTTCAG CCTTGGCTTC ACCCTGACGC CCAACGATCA GTTGAGCCTG
ACCGCCGATG CCTACGTGAT CAATCTGCGC GACCGCATCA CCCTGACCGG CACTTTGCTG
GGCAACGAAG TTACTCAGGT GCTGCTCAAC AACGGCGTCG ATTCGACGTC GGGCGGCCAG
TATTTCATCA ACGGTGCCGA CACCCGCACC AAAGGCCTCG ACCTGGTCAG CAACTACCGC
CAGGACCTGG GCCAGTACGG TTCGTTGACG TGGACCGCAG CGTTCAACTG GAACCAGACC
AAAATCCTTG GCTACAAGGA ATCCACTTCA ATCCTGGGTA CGTCCTATGA ATTGATGGAC
CGCGAGGCTC GCAATCTGAT TACCGGCGTG CAGCCGCACA CCAAGCTGAT TCTAGGCGGC
GACTGGAGCA TCGGGCGCTT CAATCTGAAC CTGGCGCTGA CCCGCTACGG CGCTTACAAA
GAGGTCAATT CATCGGCCAA TCGCGACCTG GACCGGGTGT ACAGCGCCAA GTGGATCACC
GACCTGGACC TTGATTACAA CCTCAGCAAA AACCTCAACG TCGCCATCGG CGCAAAGAAC
CTGTTCGACA TCTACCCGAA AAAACAGGGG GTCCCCAGCA GCACGATGGT CAGCAGCTAC
GGCACCTATT CGCCCTACGG TTTTACCGGC GGTTACTACT ACACCCGGCT GACTTACGCT
TTTTAA
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| Protein sequence | MSGVDMKQVL HRARASSAAP GFCPLALAIG GVLLSGTIQA QEKTFEDERR TLSTVVVTGN
RGAEQRTVTS SPVPIDVVSA KQLQSTGKPG LMEALSAVIP SLTLPEKTGW DASGIARAPN
LRGLSAAEVL VLVNGKRRHT SATLSINGIN TGAAPADLDL IPISAIDHVE VLRDGAAAQY
GSDAIAGVIN VILKADTSGT SVTNAGLGYD GKKQTVQQSL NKGFEIGDGG IVQLALDARS
QNDDNKASAN GYSYEQAYDL AGKSTYGGYG TPKTNLLTLG YNAELPIDDS FSLYSFTTYS
RRKGEQGQNF RLPTITNTIP TGPNGYPAGY TPTWYIDEDD FQAAFGGKGT LGEWDWDLST
TYGRNEAEQG TTHNQNPSLG QATPNSFTSG TWISTELTTN LDFKRGFDVG LQKPLDVSYG
FEHRRDTYEV QAGDYESYAN GGYCVAPGNC ASSGAQVTNG ISPDEESSAS RNSVASYVDV
GFNPVPDWYV GSALRYEHYN QGVGATRSGK LTTRYDFTPQ FAVRATVSNG FRAPSLANSL
FSARSTTYGV VDGVYQSINY GVLPTGSGAA RALGAEDLKP ERSTNFSLGF TLTPNDQLSL
TADAYVINLR DRITLTGTLL GNEVTQVLLN NGVDSTSGGQ YFINGADTRT KGLDLVSNYR
QDLGQYGSLT WTAAFNWNQT KILGYKESTS ILGTSYELMD REARNLITGV QPHTKLILGG
DWSIGRFNLN LALTRYGAYK EVNSSANRDL DRVYSAKWIT DLDLDYNLSK NLNVAIGAKN
LFDIYPKKQG VPSSTMVSSY GTYSPYGFTG GYYYTRLTYA F
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