| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2989 |
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| Symbol | |
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| ID | 1184645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3360726 |
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| End bp | 3361607 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394351 |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_792786 |
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| Protein GI | 28870167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.115957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCT TCTTTGAAGT GCTGATCGGC GGGTTGCTGG CCGGTGTCAT GTACTCGCTG
GTGGCGATTG GCTTTGTGCT GATCTACAAG GCCTCGGGCG TGTTCAATTT CGCTCAAGGC
GCGATGGTGC TGTTCGCGGC ACTGACGTTT GTCAGCCTGC TGGAGCGTGG CGTGCCGTTC
TTCTGGGCGT TTCTGGCGAC GTTGGCGAGC ATGGCCGTGC TGGCACTGCT GATCGAAAGA
CTGGTCCTGC GCCCGCTGGT CAACCGGCCG CCGATCATCT TGTTCATGGC CACCCTTGGC
CTTTCGTACA TGATCGAAGG CTTGGCGCAA GCGTTGTGGG GCGCGCAGGT GCACGGCCTG
GAACTGGGCA TTCCCGACGA GCCACTGGAA ATTCGCGGCA TGCTGCTCTC GCAGTTCGAC
CTGTTCGCAG CGGGCACGGC TGCGGCGCTG GTGATTGCCC TGTCGGTGCT GTTCAACCGC
ACGCGGATCG GCCTGTCATT GCGGGCGGTG GCGGATGACC CGCTGGCGTC GTTGGCGGTG
GGTATCCGGC TGCCACGCAT CTGGGCGGTG GTCTGGGCCG TGGCCGGGTT TGTCGGGCTG
GTGGCCGGGC TGCTTTGGGG CGCGCGGCTG GGGGTGCAGT TTTCCCTGTC GCTGGTGGTG
CTCAAGGCAC TGCCGGTGCT GATCATCGGT GGGTTTTCCT CGATTGGCGG CGCCATTGTC
GGCGGCCTGA TCATCGGCGC GTCCGAGAAG CTGGCCGAGA TTTACCTGGG GCCGATCATC
GGCAGCGGTA TCGAAAACTG GGTGCCGTAT GTGCTGGCGC TGTTGTTTCT GCTGGTTCGT
CCTGCTGGCC TGTTCGGCGA GCGGGCGATA GAGCGCGTCT GA
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| Protein sequence | MEFFFEVLIG GLLAGVMYSL VAIGFVLIYK ASGVFNFAQG AMVLFAALTF VSLLERGVPF
FWAFLATLAS MAVLALLIER LVLRPLVNRP PIILFMATLG LSYMIEGLAQ ALWGAQVHGL
ELGIPDEPLE IRGMLLSQFD LFAAGTAAAL VIALSVLFNR TRIGLSLRAV ADDPLASLAV
GIRLPRIWAV VWAVAGFVGL VAGLLWGARL GVQFSLSLVV LKALPVLIIG GFSSIGGAIV
GGLIIGASEK LAEIYLGPII GSGIENWVPY VLALLFLLVR PAGLFGERAI ERV
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