Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2930 |
Symbol | |
ID | 1184584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3294625 |
End bp | 3294933 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394291 |
Product | hypothetical protein |
Protein accession | NP_792728 |
Protein GI | 28870109 |
COG category | [S] Function unknown |
COG ID | [COG1359] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00884619 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAC CTGCAAAGCC ATTGGCGTTG ATCGCAGTGC TGAAAGCCAG TCCAGGCAAC GAGTCGGCAT TGAAAGAAGC TTTGTTGGCA CTGGTGGAAC CCACCCGTTC GGAGCCGGGC AACATCGAAT ACACGCTGTT CGAGGTGCGC GATGAGCACG GTACGTTCTA CATGCGCGAA TGCTTCAAGG ACCAGGCAGC ACTGGACGCG CATGTTGCCA CGCCACACTA CCAGCAGTTT GCGGCTGCAA GCGGCGAGTG GTTTGCAGAA GCGCCACGGC TGATTTTTCT GGACCAGGTT TCAAACTGA
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Protein sequence | MNTPAKPLAL IAVLKASPGN ESALKEALLA LVEPTRSEPG NIEYTLFEVR DEHGTFYMRE CFKDQAALDA HVATPHYQQF AAASGEWFAE APRLIFLDQV SN
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