Gene PSPTO_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2930 
Symbol 
ID1184584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3294625 
End bp3294933 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content56% 
IMG OID637394291 
Producthypothetical protein 
Protein accessionNP_792728 
Protein GI28870109 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00884619 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC CTGCAAAGCC ATTGGCGTTG ATCGCAGTGC TGAAAGCCAG TCCAGGCAAC 
GAGTCGGCAT TGAAAGAAGC TTTGTTGGCA CTGGTGGAAC CCACCCGTTC GGAGCCGGGC
AACATCGAAT ACACGCTGTT CGAGGTGCGC GATGAGCACG GTACGTTCTA CATGCGCGAA
TGCTTCAAGG ACCAGGCAGC ACTGGACGCG CATGTTGCCA CGCCACACTA CCAGCAGTTT
GCGGCTGCAA GCGGCGAGTG GTTTGCAGAA GCGCCACGGC TGATTTTTCT GGACCAGGTT
TCAAACTGA
 
Protein sequence
MNTPAKPLAL IAVLKASPGN ESALKEALLA LVEPTRSEPG NIEYTLFEVR DEHGTFYMRE 
CFKDQAALDA HVATPHYQQF AAASGEWFAE APRLIFLDQV SN