| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2847 |
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| Symbol | |
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| ID | 1184501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3198450 |
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| End bp | 3199280 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394213 |
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| Product | ThiJ/PfpI family protein |
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| Protein accession | NP_792650 |
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| Protein GI | 28870031 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00201065 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACA ACCAACGTCG CAACCTAGTA ATTGGTGCGT TGCTCGCACC GTTGGCGGCC
AGCATCACCC TCAAAGCCTC GGCTGCTGAC AAGCCCATGC ACCCACATGC GATGCCGGAT
ATGGGCCCCG ACATGAACAA AGTACCCTGG ATGGGCGACG AGCAAATCGC AATGCTGGTG
TATCCAGGCA TGACCGTAAT GGATCTCGTG GGGCCGCACT GCATGTTTGG TTCGCTCATG
GGCGCCAAGA TTTATATTGT TGCCAAGTCG CTGGACCCAG TGACGAGCGA TGCGGGATTA
GCGATTGTAC CTACCGCCAC CTTTGGCACC TGTCCTCGCG ACCTGACAGT GCTGTTTGCG
CCGGGAGGCA CGGACGGCAC TCTGGCAGCA GCCTCTGATG CCGAGACCCT GGCTTTTATG
GCTGATCGTG GCGCACGCGC GAAATACATC ACAAGTGTCT GCTCGGGCTC GTTGATCCTA
GGTGCGGCGG GGTTGTTGAA AGGTTACAAG GCGACGTCGC ACTGGTCGTG CCGGGATGCG
CTAGCCGGGT TCGGTGCGAT TCCTACCGAA GCGCGTGTTG TGCGCGACCG CAACCGGATT
ACCGGCGCTG GTGTAACGGC AGGACTGGAT TTCGGCTTGA GTATGGTTGC GGAACTACGC
GACCAGACCT ACGCCGAGTG CGCCCAACTG ATGAGCGAGT ACGACCCCGA TCCTCCGTTC
AACGCGGGCT CTATGAAGAC CGCTCCGGCG CATGTGAGGA CTGCGATGAT CGAACTGGTG
GCGGAATTTA CGAAGAAAGC AGACGCGCTC GCTGGCTTCC CGAAAGGCTG A
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| Protein sequence | MIDNQRRNLV IGALLAPLAA SITLKASAAD KPMHPHAMPD MGPDMNKVPW MGDEQIAMLV
YPGMTVMDLV GPHCMFGSLM GAKIYIVAKS LDPVTSDAGL AIVPTATFGT CPRDLTVLFA
PGGTDGTLAA ASDAETLAFM ADRGARAKYI TSVCSGSLIL GAAGLLKGYK ATSHWSCRDA
LAGFGAIPTE ARVVRDRNRI TGAGVTAGLD FGLSMVAELR DQTYAECAQL MSEYDPDPPF
NAGSMKTAPA HVRTAMIELV AEFTKKADAL AGFPKG
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