| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2842 |
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| Symbol | |
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| ID | 1184496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3193490 |
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| End bp | 3194245 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394208 |
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| Product | ISPsy14, transposition helper protein |
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| Protein accession | NP_792645 |
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| Protein GI | 28870026 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1484] DNA replication protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00133865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACCGA ATCCAACGCT CGACAAGCTA CAAACCCTGC GCCTGCACGG CATGATCAAG
TCGCTGGGCG AGCAACACGC AACGCCCGAT ATCAATGACT TGAGCTTCGA TGAACGCCTC
GGCCTGATGG TCGACCGCGA GGTGACCGAG CGCGAAGACG CCCGCCTGAC CACTCGCCTC
AAAGCGGCGC GGTTGCGCCA CAACGCCTGC CTGGAAGACA TCGACTACCG CAGCCCGCGT
GGCCTGGACA AGGCCATGAT CCTGCAACTG GGCGGTGGCC AGTGGCTGCG TGATGGCCTG
AACTTGATCA TCGGCGGGCC AACTGGCGTA GGCAAAACCT GGCTCGCCTG CGCGCTGGCC
CACAAGGCCT GCCGCGACGG CTACAGCGTG CGTTACCTGC GCCTGCCGCG CTTGATGGAG
GAGCTGGGCC TGGCCCATGG CGACGGCCGC TTCGCCAAAC TGATGGCCGG CTACGCCAAG
ACCGACCTGC TGATCCTGGA CGACTGGGGC CTGGCACCGT TTACTGCCGC GCGACGACGC
GACATGCTTG AGCTGCTGGA CGACCGCTAC GGCAACCGCT CGACACTGGT CACCAGCCAG
ATGCCGGTGG ACAAATGGCA TGCGCTAATC GGCGATCCGA CCTTGGGCGA CGCGATCCTC
GACCGGCTGG TGCACAACGC TTATCGGATC GAACTGAAGG GCGAGTCGAT GCGCAGACGC
GCAACGAAAT TGACGACGGC AGGGACTTCA GACTAA
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| Protein sequence | MLPNPTLDKL QTLRLHGMIK SLGEQHATPD INDLSFDERL GLMVDREVTE REDARLTTRL
KAARLRHNAC LEDIDYRSPR GLDKAMILQL GGGQWLRDGL NLIIGGPTGV GKTWLACALA
HKACRDGYSV RYLRLPRLME ELGLAHGDGR FAKLMAGYAK TDLLILDDWG LAPFTAARRR
DMLELLDDRY GNRSTLVTSQ MPVDKWHALI GDPTLGDAIL DRLVHNAYRI ELKGESMRRR
ATKLTTAGTS D
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