| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2785 |
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| Symbol | |
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| ID | 1184439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3104282 |
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| End bp | 3105361 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394153 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | NP_792590 |
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| Protein GI | 28869971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0573918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAA AATCCCTTGC TGCACTGATG TTGCTGGCCT CGACCAGCCA TGCGGCAGAG
ACGGTCAATA TCTACAACTG GACGGACTAT ATTGCTCCGG ACACCTTGAA AAATTTCGAA
GCAGCCAGCG GTTTCAAGAC CACTTACCAG ACCTATGAGA GTAACGAGGC GCTGAACGCC
AAACTGATCG CTGGGCATTC CGGCCACGAT CTGGTCTTTC CGTCCATTCA CTTCATGGGG
CGGCAGATCG AAAAGGGCCT GCTCAAGACG CTCGACAAGA AACAGCTGCC CAACTGGAAA
AACCTCAATC CGGTCTTGCT CAAGGCGCTG CAGGGCAGCG ACCCCGGCAA TCAGCATGGT
TTTCCTTATT TGTGGGGCAG CACCGGGATC GGCTACGACG TGGCCAAAGT CAAGGCGGTG
CTGGGCAAGG ATGCACCGCT TGATTCCTGG GACCTGGTCC TCAAGCCGGA AAACATGAAA
AAACTCGCCC AGTGCGGCGT CGCCTTTCTG GACAGCGCGC CCGCGCTGCT GCCGATCACT
CTGAATTACC TAGGCCTGCC GCCGCACAGT GAAGTGCCGG ACGATTACAC CAAGGCCAAG
GCGGTGCTTG ATGGCGTACG GCCGTACGTG CGCAACTTCA GTTCCTCCGA TTACATCAAC
GACCTTGCGG CGGGCAAGAT TTGTGTAGCG GTAGGCTACT CCGGCGATAT CTCTCTGGCG
CAGGAGCAGG CACACAAGGC CGGGAGCAGC GCGAGGATCA ATTACGTGGT TCCAAAAGAG
GGCGCACCCA TGTGGTTTGA CATGATCGCC ATCCCGGCTG ACGCGCCTGA TACCAAGGGC
GCTTATGCCT TCATGAATTA CCTGCTGCGC CCGGAAGTGA TCGCCAATAT CACCAATAGC
GTGCATTACG CCAACGGTAA CGAAAAGGCA GACGCTCTGA TCAACCCGGG CCTGTGGACG
GACACCACGG TGTATCCTGA CGAAGACATG CTGAGCCGCT TGTTTGTGAT GTCTCAGGTG
CCGGTCAATA TCGAATCTCT GCGTACCGGG CTCTGGGACG CAGTGAAAGC CGGCCAGTAA
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| Protein sequence | MLKKSLAALM LLASTSHAAE TVNIYNWTDY IAPDTLKNFE AASGFKTTYQ TYESNEALNA
KLIAGHSGHD LVFPSIHFMG RQIEKGLLKT LDKKQLPNWK NLNPVLLKAL QGSDPGNQHG
FPYLWGSTGI GYDVAKVKAV LGKDAPLDSW DLVLKPENMK KLAQCGVAFL DSAPALLPIT
LNYLGLPPHS EVPDDYTKAK AVLDGVRPYV RNFSSSDYIN DLAAGKICVA VGYSGDISLA
QEQAHKAGSS ARINYVVPKE GAPMWFDMIA IPADAPDTKG AYAFMNYLLR PEVIANITNS
VHYANGNEKA DALINPGLWT DTTVYPDEDM LSRLFVMSQV PVNIESLRTG LWDAVKAGQ
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