Gene PSPTO_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2748 
Symbol 
ID1184402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3053803 
End bp3054474 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID637394117 
Producthypothetical protein 
Protein accessionNP_792554 
Protein GI28869935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.176962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTAC CTGCTGCAAT CGCGGGTGAA ATCCGCCAAC TCGACAGTGG TTACTCCCGT 
GAGACCCGTG CCTTGCTGTT CAGGGCCTAT CGGCACGACC CGACGTTCGC GTATCTGTTC 
AATGCCGAAC GAGAAGGATA CGAGCAACGT GTACTGGCGA CCATTCGCCA ACTGGTCAAA 
CAACACTTTC TGCAGAACCA GCCTGCCTTG GGCCTGTTTC TGGAAGATCG TCTGGTGGGT 
GTCGCGCTGA TCGCGCCGCC ACTGCGTCGT CTTGGCGTCA CCGAGAGCTG GGCCTGGCGC 
CTGCGAATGG TGATGGACAC CGGCCTGGGC TGCACTCAGC GGTATCTGGC TTATTACAAC 
GCAGTGCTGG CATGCCTGCC TTCCGAAACC GTCCACGTGC TGCCGCTCAT CGGGCTGGAT 
CCGGAGTTTC AGGGCCAGAA GATGGGTCAG GACCTGAGCG AGCAATTGCT TGCAGCGCTG 
CACGACTGGT GCGCCGTGGA CGAAAACTCG CAGGGTATCG TCGTTGACAC CGGGAATCCT 
CGCTATCTCG AGTTCTATAA ACGACAGGGC TATGAGGAAA TCGGGGAGAT AGCAGTAGGA 
CCCGTCCGAG AGCACGTATT TTTTCACCCA AACCCTCAGG TTTCACTGCC GGTACCTGAC 
GTAACGGTTT GA
 
Protein sequence
MSLPAAIAGE IRQLDSGYSR ETRALLFRAY RHDPTFAYLF NAEREGYEQR VLATIRQLVK 
QHFLQNQPAL GLFLEDRLVG VALIAPPLRR LGVTESWAWR LRMVMDTGLG CTQRYLAYYN 
AVLACLPSET VHVLPLIGLD PEFQGQKMGQ DLSEQLLAAL HDWCAVDENS QGIVVDTGNP 
RYLEFYKRQG YEEIGEIAVG PVREHVFFHP NPQVSLPVPD VTV