Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2747 |
Symbol | xthA |
ID | 1184401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3052800 |
End bp | 3053612 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394116 |
Product | exodeoxyribonuclease III |
Protein accession | NP_792553 |
Protein GI | 28869934 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0614534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCG TCTCGTTCAA CATCAATGGT CTGCGCGCTC GACCGCATCA GTTGGCGGCG CTGATCGACA AACACCAGCC TGACGTGATC GGCCTGCAGG AAACCAAGGT CTCGGACGAG CAATTCCCTC TGGCGGACGT CGAAGCGCTC GGCTATCACG TGCACTTTCA CGGTCAGAAA GGCCATTACG GCGTCGCTCT GCTGTCGCGC AATCCGCCAC TGGCCCTGCA CAAGGGTTTT GAGGGTGACG ACGAGGAATC CCAGAAGCGC TTCATTCGGG GCACCTACGC TGACAGCAAT GGCCAGCCGG TGACCATCAT GAACGGCTAT TTTCCGCAGG GCGAAAGCCG CGACCACCCG ACCAAGTTTC CGGCCAAACA GCGTTTCTAC GAGAACCTCC AGGCGCTGCT GGAAGGCCAC TTCAGTAATG AGCAGCCGCT GATTGTCATG GGCGACGTGA ACATCTCCCC CCAGGATTGC GATATCGGTA TTGGTGCCGA CAATGCCAAG CGGTGGCTGA AAACCGGCAA ATGCAGCTTC CTGCCCGAAG AGCGCGAGTG GATGGAACGT CTGAAGAACT GGGGGCTGGT GGACAGCTTC CGTTATCTGT ATCCAGAGGT CAGCGACCGC TTTAGCTGGT TCGACTATCG CAGCCGCGGC TTTGAGGATG AACCCAAGCG CGGCCTGCGC ATCGACCTGA TCATGACCTC CACCGGTCTG CAGCCGCGAA TCAGGGCCGC CGGCGTGGAC TACGATTTGC GCGGCATGGA AAAACCCTCG GACCATGCGC CGATCTGGCT TGAACTGAGC TGA
|
Protein sequence | MKIVSFNING LRARPHQLAA LIDKHQPDVI GLQETKVSDE QFPLADVEAL GYHVHFHGQK GHYGVALLSR NPPLALHKGF EGDDEESQKR FIRGTYADSN GQPVTIMNGY FPQGESRDHP TKFPAKQRFY ENLQALLEGH FSNEQPLIVM GDVNISPQDC DIGIGADNAK RWLKTGKCSF LPEEREWMER LKNWGLVDSF RYLYPEVSDR FSWFDYRSRG FEDEPKRGLR IDLIMTSTGL QPRIRAAGVD YDLRGMEKPS DHAPIWLELS
|
| |