Gene PSPTO_2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2747 
SymbolxthA 
ID1184401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3052800 
End bp3053612 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID637394116 
Productexodeoxyribonuclease III 
Protein accessionNP_792553 
Protein GI28869934 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0614534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG TCTCGTTCAA CATCAATGGT CTGCGCGCTC GACCGCATCA GTTGGCGGCG 
CTGATCGACA AACACCAGCC TGACGTGATC GGCCTGCAGG AAACCAAGGT CTCGGACGAG
CAATTCCCTC TGGCGGACGT CGAAGCGCTC GGCTATCACG TGCACTTTCA CGGTCAGAAA
GGCCATTACG GCGTCGCTCT GCTGTCGCGC AATCCGCCAC TGGCCCTGCA CAAGGGTTTT
GAGGGTGACG ACGAGGAATC CCAGAAGCGC TTCATTCGGG GCACCTACGC TGACAGCAAT
GGCCAGCCGG TGACCATCAT GAACGGCTAT TTTCCGCAGG GCGAAAGCCG CGACCACCCG
ACCAAGTTTC CGGCCAAACA GCGTTTCTAC GAGAACCTCC AGGCGCTGCT GGAAGGCCAC
TTCAGTAATG AGCAGCCGCT GATTGTCATG GGCGACGTGA ACATCTCCCC CCAGGATTGC
GATATCGGTA TTGGTGCCGA CAATGCCAAG CGGTGGCTGA AAACCGGCAA ATGCAGCTTC
CTGCCCGAAG AGCGCGAGTG GATGGAACGT CTGAAGAACT GGGGGCTGGT GGACAGCTTC
CGTTATCTGT ATCCAGAGGT CAGCGACCGC TTTAGCTGGT TCGACTATCG CAGCCGCGGC
TTTGAGGATG AACCCAAGCG CGGCCTGCGC ATCGACCTGA TCATGACCTC CACCGGTCTG
CAGCCGCGAA TCAGGGCCGC CGGCGTGGAC TACGATTTGC GCGGCATGGA AAAACCCTCG
GACCATGCGC CGATCTGGCT TGAACTGAGC TGA
 
Protein sequence
MKIVSFNING LRARPHQLAA LIDKHQPDVI GLQETKVSDE QFPLADVEAL GYHVHFHGQK 
GHYGVALLSR NPPLALHKGF EGDDEESQKR FIRGTYADSN GQPVTIMNGY FPQGESRDHP
TKFPAKQRFY ENLQALLEGH FSNEQPLIVM GDVNISPQDC DIGIGADNAK RWLKTGKCSF
LPEEREWMER LKNWGLVDSF RYLYPEVSDR FSWFDYRSRG FEDEPKRGLR IDLIMTSTGL
QPRIRAAGVD YDLRGMEKPS DHAPIWLELS