Gene PSPTO_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2716 
Symbol 
ID1184370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3014480 
End bp3014857 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID637394085 
Productresponse regulator 
Protein accessionNP_792522 
Protein GI28869903 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.59583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCTG ATGCAGAAAA CGTCGTACTA ATCGTCGAAG ACGAACCCCT GATCCTGATG 
TTGCTGGCCG ATTATCTGTC TGGTGAGGGC TATCGCGTTC TGCAGGCCGA GAATGGCGAG
CAGGCTTTTG AGATTCTGGC AACCAAGCCC CACCTTGATT TGATGATCAC CGATTACCGA
TTGCCCGGTG GTATCTCGGG TGTGCAGATT GCCGAGCCCG CGGTCATGCT ACGGCCTGAA
CTGAAGGTGA TTTTCATCAG CGGCTATCCG GCGGAAATTC TCGATTCAGG CAGCCCCATT
GCGCTGAAAG CGCCGATCCT CGCCAAACCC TTCACCATGG AAACGCTGCA GTCGCAGATT
CAGCGCTTGC TGGCCTGA
 
Protein sequence
MSADAENVVL IVEDEPLILM LLADYLSGEG YRVLQAENGE QAFEILATKP HLDLMITDYR 
LPGGISGVQI AEPAVMLRPE LKVIFISGYP AEILDSGSPI ALKAPILAKP FTMETLQSQI
QRLLA