Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2716 |
Symbol | |
ID | 1184370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3014480 |
End bp | 3014857 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394085 |
Product | response regulator |
Protein accession | NP_792522 |
Protein GI | 28869903 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.59583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCTG ATGCAGAAAA CGTCGTACTA ATCGTCGAAG ACGAACCCCT GATCCTGATG TTGCTGGCCG ATTATCTGTC TGGTGAGGGC TATCGCGTTC TGCAGGCCGA GAATGGCGAG CAGGCTTTTG AGATTCTGGC AACCAAGCCC CACCTTGATT TGATGATCAC CGATTACCGA TTGCCCGGTG GTATCTCGGG TGTGCAGATT GCCGAGCCCG CGGTCATGCT ACGGCCTGAA CTGAAGGTGA TTTTCATCAG CGGCTATCCG GCGGAAATTC TCGATTCAGG CAGCCCCATT GCGCTGAAAG CGCCGATCCT CGCCAAACCC TTCACCATGG AAACGCTGCA GTCGCAGATT CAGCGCTTGC TGGCCTGA
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Protein sequence | MSADAENVVL IVEDEPLILM LLADYLSGEG YRVLQAENGE QAFEILATKP HLDLMITDYR LPGGISGVQI AEPAVMLRPE LKVIFISGYP AEILDSGSPI ALKAPILAKP FTMETLQSQI QRLLA
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