Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2708 |
Symbol | mltR |
ID | 1184362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3004371 |
End bp | 3005276 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637394077 |
Product | transcriptional activator MltR |
Protein accession | NP_792514 |
Protein GI | 28869895 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.215541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA CAACAAAAAT TACTGACCCT TCCTACGAGC TGATGGACGA CCATAACGGC TTGTCGATCA TTTATCGCGA GCATGGTTTT CCGTGCCCGC TGGTGCGCTG GCACTTCCAC AAGGAATACG AGCTGCATCT GATTGTCGCC AGCTCCGGCA AGGTCTTCGT CGGTGACTAC ATCGGTAACT TCAACCCTGC CAGCCTGTTC CTGACCGGGC CTAACCTGCC GCATAACTGG ATCAGCCAGG TTGACGAGGG TGAAGTCGTG GCGCGGCGCG ACATGCTGGT CAATTTCACC GATGAACTGC TGGAAAGTGG CAATCAGGTG TTTGCCGAAC TCAAGACCCT CACCCCACTG CTGGAACGCG CCCGCTACGG CATCGAATTT CGCTGCAAGC GCACAATTCG TCAGGCCATG AAGCAGATGC AGAAAATTGC CGACTCGCGC GGCATTACAC GTCTGGGGCA CTTTTTCATT CTTCTCGAGC TGTTGGCCGC CAGCGATGAT TATCAGTTGC TGTCAGGCAC CGCCGTCGCC CACACGGCCG ATGAGCACAG CGTCGATCGT ACCAACCGCG CAGTGGATTA TATTTTTGCT CACTACAGCC GGGAGCTGCC GCTGGAAGAA GTTGCCGAGT ACCTGGGCAT GAAACCCACT TACTTTTCCA GGGTATTCAA GCAGGCCACG GGGCGCTGTT TCGTCGAGTT CGTCAATCGG TTGCGCATCA GCAAGTCCTG TGAACTGCTG GCCGACGGCG ACAAAACGGT CACTGACGTG TGTTTCGAGT CCGGTTTCAA CAATATTTCC AACTTCAATC GGCGTTTCCA GCAGCTCAAG GGCATGACCC CCTCGCACTA TCGTCGCCTC GCCGTTCAGC GCCTGACCGA ACAAAACCTG TACTGA
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Protein sequence | MSKTTKITDP SYELMDDHNG LSIIYREHGF PCPLVRWHFH KEYELHLIVA SSGKVFVGDY IGNFNPASLF LTGPNLPHNW ISQVDEGEVV ARRDMLVNFT DELLESGNQV FAELKTLTPL LERARYGIEF RCKRTIRQAM KQMQKIADSR GITRLGHFFI LLELLAASDD YQLLSGTAVA HTADEHSVDR TNRAVDYIFA HYSRELPLEE VAEYLGMKPT YFSRVFKQAT GRCFVEFVNR LRISKSCELL ADGDKTVTDV CFESGFNNIS NFNRRFQQLK GMTPSHYRRL AVQRLTEQNL Y
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