Gene PSPTO_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2708 
SymbolmltR 
ID1184362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3004371 
End bp3005276 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID637394077 
Producttranscriptional activator MltR 
Protein accessionNP_792514 
Protein GI28869895 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.215541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA CAACAAAAAT TACTGACCCT TCCTACGAGC TGATGGACGA CCATAACGGC 
TTGTCGATCA TTTATCGCGA GCATGGTTTT CCGTGCCCGC TGGTGCGCTG GCACTTCCAC
AAGGAATACG AGCTGCATCT GATTGTCGCC AGCTCCGGCA AGGTCTTCGT CGGTGACTAC
ATCGGTAACT TCAACCCTGC CAGCCTGTTC CTGACCGGGC CTAACCTGCC GCATAACTGG
ATCAGCCAGG TTGACGAGGG TGAAGTCGTG GCGCGGCGCG ACATGCTGGT CAATTTCACC
GATGAACTGC TGGAAAGTGG CAATCAGGTG TTTGCCGAAC TCAAGACCCT CACCCCACTG
CTGGAACGCG CCCGCTACGG CATCGAATTT CGCTGCAAGC GCACAATTCG TCAGGCCATG
AAGCAGATGC AGAAAATTGC CGACTCGCGC GGCATTACAC GTCTGGGGCA CTTTTTCATT
CTTCTCGAGC TGTTGGCCGC CAGCGATGAT TATCAGTTGC TGTCAGGCAC CGCCGTCGCC
CACACGGCCG ATGAGCACAG CGTCGATCGT ACCAACCGCG CAGTGGATTA TATTTTTGCT
CACTACAGCC GGGAGCTGCC GCTGGAAGAA GTTGCCGAGT ACCTGGGCAT GAAACCCACT
TACTTTTCCA GGGTATTCAA GCAGGCCACG GGGCGCTGTT TCGTCGAGTT CGTCAATCGG
TTGCGCATCA GCAAGTCCTG TGAACTGCTG GCCGACGGCG ACAAAACGGT CACTGACGTG
TGTTTCGAGT CCGGTTTCAA CAATATTTCC AACTTCAATC GGCGTTTCCA GCAGCTCAAG
GGCATGACCC CCTCGCACTA TCGTCGCCTC GCCGTTCAGC GCCTGACCGA ACAAAACCTG
TACTGA
 
Protein sequence
MSKTTKITDP SYELMDDHNG LSIIYREHGF PCPLVRWHFH KEYELHLIVA SSGKVFVGDY 
IGNFNPASLF LTGPNLPHNW ISQVDEGEVV ARRDMLVNFT DELLESGNQV FAELKTLTPL
LERARYGIEF RCKRTIRQAM KQMQKIADSR GITRLGHFFI LLELLAASDD YQLLSGTAVA
HTADEHSVDR TNRAVDYIFA HYSRELPLEE VAEYLGMKPT YFSRVFKQAT GRCFVEFVNR
LRISKSCELL ADGDKTVTDV CFESGFNNIS NFNRRFQQLK GMTPSHYRRL AVQRLTEQNL
Y