| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2705 |
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| Symbol | |
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| ID | 1184359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3000944 |
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| End bp | 3001777 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394074 |
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| Product | mannitol ABC transporter, permease protein |
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| Protein accession | NP_792511 |
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| Protein GI | 28869892 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00559467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC TTAAACAATC GCGTCGTTTA CAAAGCCTGC TGCTCGGGAC CTTGTCTTGG
CTGATCGCCG CCCTGGTGTT CTTCCCGATC TTCTGGATGG TGCTGACCAG CTTCAAGACC
GAGATCGACG CGTTTGCGAC ACCGCCGCAG TTGTTCTTCA CCCCGACCCT GGAAAACTAC
CTGCACATTC AGGAACGCAG CGATTACTTT CACTTTGCCT GGAACTCGGT GCTGATTTCC
TTCAGCGCCA CGGCGCTGGC CATGCTGATC GCCATCCCTG CGGCGTATTC CATGGCATTT
TTCGAGACCA AACGCACCAA AAGCACGCTG CTGTGGATGC TCTCGACCAA AATGCTGCCG
CCAGTGGGCG TGCTGATGCC GATCTACCTG CTGGCCAAGA CCTTCGGCCT GCTGGATTCG
CGATTGGCGC TGATCATCAT CTACACGCTG ATCAATCTGC CGATCGTGGT GTGGATGATC
TACACCTACT TCAAGGACAT TCCCGGCGAA ATCCTCGAAG CCTCGCGCTT GGACGGCGCC
AGCACCCGGC AGGAGATCTT TCGCGTGCTG ATACCGATCT GCAAGGGTGG TCTGGCATCC
ACCGCGTTGC TGTCGCTGAT TCTGTGCTGG AACGAAGCGT TCTGGTCGCT GAACCTTACC
TCGTCTGCCG CTGCGCCCCT TACCGCGCTG ATCGCGTCCT ACTCCAGCCC CGAAGGGCTG
TTCTGGGCCA AGCTCTCGGC GGTCTCGACC CTGGCGTGTG CGCCCATCCT GATTTTCGGC
TGGATCAGTC AGAAACAACT GGTTCGCGGC CTGTCGTTCG GCGCTGTCAA ATAG
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| Protein sequence | MMTLKQSRRL QSLLLGTLSW LIAALVFFPI FWMVLTSFKT EIDAFATPPQ LFFTPTLENY
LHIQERSDYF HFAWNSVLIS FSATALAMLI AIPAAYSMAF FETKRTKSTL LWMLSTKMLP
PVGVLMPIYL LAKTFGLLDS RLALIIIYTL INLPIVVWMI YTYFKDIPGE ILEASRLDGA
STRQEIFRVL IPICKGGLAS TALLSLILCW NEAFWSLNLT SSAAAPLTAL IASYSSPEGL
FWAKLSAVST LACAPILIFG WISQKQLVRG LSFGAVK
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