| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2688 |
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| Symbol | |
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| ID | 1184340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2982076 |
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| End bp | 2983230 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394056 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_792495 |
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| Protein GI | 28869876 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTGC CCATACTGCT GTTGTCGGCC GCCGGTTTCA CCGTGCTGAC CACAGAGTTC
GTTATCGTCG GTCTTTTACC CGCCATTGCC CGCGACCTGG ACGTCTCGGT TTCGCAGGCC
GGGCTGCTGC TGACGCTGTT TGCGTTCACC GTCGCAGCCT TTGGCCCGTT TCTGACCGCG
TATTTTTCGC GCTTCGAGCG CAAGCGTCTG TTTATCAGCA TCCTCATCCT GTTCGGGCTG
GCCAATGCGC TGGCTGCGTT GGCCCCTGAT ATTGCGGTGA TGGGCGTCGC GCGCTTGATT
CCGGCGTTAG GCCTGCCGGT GTTCTGGGCG CTGGCCAGCG AAACCGCCGT GGACATCGTC
GGACCGGAGT TCGCCGGGCG GGCGATTGCC CGCATCGGTT TCGGGATTGT CTGCGCCACG
GTGTTCGGCA TCCCCGTTGG CACCCTGATT TCGGATGCGT TCGGCTGGCG CAGCGCGTTC
TTCGTGCTGT CCGGGCTGGC GTTTGCCAAG GCGCTGTTGC TGGCGGTGTA TCTGCCAAGG
ACGGCCGCAA AGAAAAACCC GGTTTCAATC CTCAAGCAAT TCGGCATTTT GCGCAGTCCG
ATCATGCAGG GGCATGTGCT GCTGTCGGTT CTGGTGTTCA GCGGTATGTT CACGGCCTAT
ACCTACCTGG CAGACATGCT CGAGCGGCTG GCCGGGTTCG ACGGCAATCT GGTGGGCTGG
TGCCTGATGG GCTTTGGTGC GGTCGGTTTG CTCGGCAACT CGCTGGGCGG GCGCATGGTC
GACCGGCATC CGTTGATGGC CAGTCTGGTG TTCTGCGCCT TCATGGTGGT CGGCATGACT
GCCGTGGTGC CGAGCATTCA TTCGGTATTT GCCTTGCCAC TCGCGCTGGC GGTATGGGGC
ATCACCCAGG CGGCGCTGTT TCTGGTCAGT CACGTGCGGC TGATCAAGGC CGCGCCCCAG
GCGCCTGCGT TCGCTGCCTC GCTGAATATC GCCGGGGCGA ACCTGGGCAT CGGCATCGGA
GCGTTCATCG GTGGCAGGGT CATTGATCAT CTGGGGCTGG GTAACGTCGG TTTCGCCGCT
GCGGGCATCA TCGTTCTGGC CATTGTGCTG GCGCTTTTGC TGATCAAACG TGATCCCGGC
CCGCTCGCTG CCTAG
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| Protein sequence | MLLPILLLSA AGFTVLTTEF VIVGLLPAIA RDLDVSVSQA GLLLTLFAFT VAAFGPFLTA
YFSRFERKRL FISILILFGL ANALAALAPD IAVMGVARLI PALGLPVFWA LASETAVDIV
GPEFAGRAIA RIGFGIVCAT VFGIPVGTLI SDAFGWRSAF FVLSGLAFAK ALLLAVYLPR
TAAKKNPVSI LKQFGILRSP IMQGHVLLSV LVFSGMFTAY TYLADMLERL AGFDGNLVGW
CLMGFGAVGL LGNSLGGRMV DRHPLMASLV FCAFMVVGMT AVVPSIHSVF ALPLALAVWG
ITQAALFLVS HVRLIKAAPQ APAFAASLNI AGANLGIGIG AFIGGRVIDH LGLGNVGFAA
AGIIVLAIVL ALLLIKRDPG PLAA
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