Gene PSPTO_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2686 
Symbol 
ID1184338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2980482 
End bp2981147 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID637394054 
Producthypothetical protein 
Protein accessionNP_792493 
Protein GI28869874 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG AATCGTCCGC CACCCCAACC ACCCCGAATG CCGAAGCGTT GCAGCTCAAC 
AGCACCGAAG TGCGCATTCT GGGCTGCCTG ATCGAGAAAC AGGCGACCAA CCCGGAAACC 
TATCCCCTGA CCCTCAATGC ACTGGTCATC GCCTGCAACC AGAAGACCAG CCGCGACCCG 
GTCATGAACC TCACCCAGGG TCAGGTCGGC CAGAGCCTGC GCGCGCTGGA AGGCCGTGGC 
CTGACACGTC TGGTGATGGG CAGTCGCGCT GATCGCTGGG AACACAAGGT CGACAAGGGC 
CTGGAACTGG TGCCTGCGCA GGTGATACTG ACCGGCCTGT TGCTGCTGCG TGGCCCGCAA 
ACAGTCAGTG AACTGCTGAC CCGCAGCAAT CGCATGCACG ATTTCGAGGA CAGCGAGCAG 
GTCGTTCATC AACTGGAGCG CTTGATCGCC AGAGGCCTGG CAACGCTGGT GCCGCGTCAG 
TCCGGCCAGC GCGAAGACCG CTATATGCAC CTGATCGGTG ACCCTGAGGA CCTGCAGGAC 
CTTCTTGCCG CCCGCCAGCA AGCGCCGGAG CGCGGCAACG CGGCAAGCCC TGCTGCCACT 
CAGCGTCTGG ATGAGCTGGA AGCGCGCATC GCAGCACTCG AAGAGCGGCT GGCCAGACTG 
GAATAA
 
Protein sequence
MSIESSATPT TPNAEALQLN STEVRILGCL IEKQATNPET YPLTLNALVI ACNQKTSRDP 
VMNLTQGQVG QSLRALEGRG LTRLVMGSRA DRWEHKVDKG LELVPAQVIL TGLLLLRGPQ 
TVSELLTRSN RMHDFEDSEQ VVHQLERLIA RGLATLVPRQ SGQREDRYMH LIGDPEDLQD 
LLAARQQAPE RGNAASPAAT QRLDELEARI AALEERLARL E